RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 HOXD9P28356 352 aaPredicted RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 SSTR2P30874 369 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 TAGLNQ01995 201 aaKnown RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 SNTB2Q13425 540 aaKnown RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 CCDC157Q569K6 752 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 PLEKHS1Q5SXH7 462 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 OR2G6Q5TZ20 316 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 FUT10Q6P4F1 479 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 TMEM220Q6QAJ8 160 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 MTSS1LQ765P7 747 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 KLBQ86Z14 1044 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 SYNPOQ8N3V7 929 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 TTC9BQ8N6N2 239 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 CELF5Q8N6W0 485 aaKnown RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 OR4K5Q8NGD3 323 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 OR8J2Q8NGG1 315 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 OR51G2Q8NGK0 314 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 OR8K5Q8NH50 307 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 LKAAEAR1Q8TD35 194 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 NXPE2Q96DL1 559 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 COQ10AQ96MF6 247 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 CAMK1GQ96NX5 476 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 AIF1LQ9BQI0 150 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 YIPF4Q9BSR8 244 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 SRRQ9GZT4 340 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 SUV39H2Q9H5I1 410 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ATP13A2Q9NQ11 1180 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 COMMD9Q9P000 198 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 C2orf92A0A1B0GVN3 265 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 E7EQ34 232 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 SLC43A1O75387 559 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 LRG1P02750 347 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ACADMP11310 421 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ALAS2P22557 587 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 CFL1P23528 166 aaKnown RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 FAUP35544 74 aaKnown RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 PGFP49763 221 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 CCL23P55773 120 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 GALK2Q01415 458 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 KCNC3Q14003 757 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 GBX1Q14549 363 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 CDKL4Q5MAI5 379 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 AFMIDQ63HM1 303 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 SAXO2Q658L1 398 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 LIN54Q6MZP7 749 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 CALHM3Q86XJ0 350 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 PCSK9Q8NBP7 692 aaKnown RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 LILRB1Q8NHL6 650 aaPredicted RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 RAD51AP1Q96B01 352 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 OR51J1Q9H342 316 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ELAC1Q9H777 363 aaKnown RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 TRAPPC4Q9Y296 219 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 TMEM5Q9Y2B1 443 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 PCDHGB7Q9Y5F8 929 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 FER1L6Q2WGJ9 1857 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 IQCMA0A1B0GVH7 501 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 MTMR11A4FU01 709 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 NUPL2O15504 423 aaKnown RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 SLC22A5O76082 557 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 CSF3P09919 207 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 SAGP10523 405 aaPredicted RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 CD9P21926 228 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 HOXA9P31269 272 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 PREPP48147 710 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 TGM4P49221 684 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 AP2S1P53680 142 aaPredicted RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 WDR5P61964 334 aaKnown RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 GPR162Q16538 588 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ZNF791Q3KP31 576 aaPredicted RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 RNF180Q86T96 592 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ZNF280BQ86YH2 543 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 CCDC36Q8IYA8 594 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 OR2AP1Q8NGE2 309 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 TMEM19Q96HH6 336 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 THAP7Q9BT49 309 aaPredicted RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 RBCK1Q9BYM8 510 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ARHGAP39Q9C0H5 1083 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 PPA2Q9H2U2 334 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 KLHL31Q9H511 634 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 SLC28A3Q9HAS3 691 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 NEUROD4Q9HD90 331 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ZNF226Q9NYT6 803 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ZNF69Q9UC07 566 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 NDRG2Q9UN36 371 aaKnown RBP7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 GTF2A1LQ9UNN4 478 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 ASB4Q9Y574 426 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 SNX11Q9Y5W9 270 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 IRAK3Q9Y616 596 aa7.31□□□□□ -1.24
COL6A4P1-202ENST00000487147 AHDC1Q5TGY3 1603 aaPredicted RBP7.3□□□□□ -1.24
COL6A4P1-202ENST00000487147 FXYD6-FXYD2A0A087WZ82 144 aa7.3□□□□□ -1.24
COL6A4P1-202ENST00000487147 LRRN3E7EW58 273 aa7.3□□□□□ -1.24
COL6A4P1-202ENST00000487147 K7ERQ8 282 aa7.3□□□□□ -1.24
COL6A4P1-202ENST00000487147 RNASET2O00584 256 aaKnown RBP7.3□□□□□ -1.24
COL6A4P1-202ENST00000487147 APOC3P02656 99 aa7.3□□□□□ -1.24
COL6A4P1-202ENST00000487147 RPN2P04844 631 aa7.3□□□□□ -1.24
COL6A4P1-202ENST00000487147 IL3P08700 152 aa7.3□□□□□ -1.24
COL6A4P1-202ENST00000487147 ELFN1P0C7U0 828 aa7.3□□□□□ -1.24
COL6A4P1-202ENST00000487147 RPL17P18621 184 aaKnown RBP7.3□□□□□ -1.24
COL6A4P1-202ENST00000487147 DRD5P21918 477 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms