RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 PCLAFQ15004 111 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 IMPG1Q17R60 797 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 SPRED3Q2MJR0 410 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 C6orf163Q5TEZ5 329 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 ACSM2BQ68CK6 577 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 IL20RBQ6UXL0 311 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 C9orf40Q8IXQ3 194 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 MREGQ8N565 214 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 APIPQ96GX9 242 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 FRMD6Q96NE9 622 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 GAL3ST4Q96RP7 486 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 SMC6Q96SB8 1091 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 FAIM2Q9BWQ8 316 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.77■□□□□ 0.92
CDHR3-212ENST00000487084 SLC17A7Q9P2U7 560 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 SEC14L3Q9UDX4 400 aa20.77■□□□□ 0.92
CDHR3-212ENST00000487084 KLF13Q9Y2Y9 288 aaPredicted RBP20.77■□□□□ 0.92
CDHR3-212ENST00000487084 GNG14A0A1W2PPG7 69 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 ERAL1O75616 437 aaKnown RBP20.76■□□□□ 0.91
CDHR3-212ENST00000487084 IGKV3-11P04433 115 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 NT5EP21589 574 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 ASPHQ12797 758 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 ZNF750Q32MQ0 723 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 KRT71Q3SY84 523 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 SPIN4Q56A73 249 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 SPDYAQ5MJ70 313 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 RNF111Q6ZNA4 994 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 MDGA2Q7Z553 956 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 GALNT12Q8IXK2 581 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 CPSF7Q8N684 471 aaKnown RBP20.76■□□□□ 0.91
CDHR3-212ENST00000487084 SSC4DQ8WTU2 575 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 TM4SF18Q96CE8 201 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 KLHL29Q96CT2 875 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 EBPLQ9BY08 206 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 TIMMDC1Q9NPL8 285 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 MCM8Q9UJA3 840 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 SLC5A6Q9Y289 635 aa20.76■□□□□ 0.91
CDHR3-212ENST00000487084 USP9XQ93008 2570 aaPredicted RBP20.76■□□□□ 0.91
CDHR3-212ENST00000487084 ASH1LQ9NR48 2969 aaKnown RBP20.76■□□□□ 0.91
CDHR3-212ENST00000487084 HECTD1Q9ULT8 2610 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 ASPDHA6ND91 283 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 NPIPA5E9PKD4 350 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 H3BQF6 201 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 CPMP14384 443 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 ZNF24P17028 368 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 SERPINB3P29508 390 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 MEOX1P50221 254 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 GPR85P60893 370 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 TRA2BP62995 288 aaKnown RBP20.75■□□□□ 0.91
CDHR3-212ENST00000487084 SLC48A1Q6P1K1 146 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 SLC29A4Q7RTT9 530 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 GPALPP1Q8IXQ4 340 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 NUBPLQ8TB37 319 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 TNFRSF12AQ9NP84 129 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 ERRFI1Q9UJM3 462 aaPredicted RBP20.75■□□□□ 0.91
CDHR3-212ENST00000487084 RAB21Q9UL25 225 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 NPIPA1Q9UND3 350 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 FIS1Q9Y3D6 152 aa20.75■□□□□ 0.91
CDHR3-212ENST00000487084 GOLGA6L10A6NI86 522 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 KLRC4-KLRK1H3BQV0 150 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 PEX1O43933 1283 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 TRIM13O60858 407 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 IL3P08700 152 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 PORP16435 677 aaPredicted RBP20.74■□□□□ 0.91
CDHR3-212ENST00000487084 SSTR4P31391 388 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 TIA1P31483 386 aaKnown RBP eCLIP20.74■□□□□ 0.91
CDHR3-212ENST00000487084 GALNSP34059 522 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 FEN1P39748 380 aaKnown RBP20.74■□□□□ 0.91
CDHR3-212ENST00000487084 RFC3P40938 356 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 RAE1P78406 368 aaKnown RBP20.74■□□□□ 0.91
CDHR3-212ENST00000487084 CLEC6AQ6EIG7 209 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 SULF2Q8IWU5 870 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 PSD4Q8NDX1 1056 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 TCP10LQ8TDR4 215 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 MECRQ9BV79 373 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 GATA5Q9BWX5 397 aaPredicted RBP20.74■□□□□ 0.91
CDHR3-212ENST00000487084 CXorf21Q9HAI6 301 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 PFDN4Q9NQP4 134 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 PSME2Q9UL46 239 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 DLGAP4Q9Y2H0 992 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 HIVEP3Q5T1R4 2406 aa20.74■□□□□ 0.91
CDHR3-212ENST00000487084 PTPN13Q12923 2485 aa20.73■□□□□ 0.91
CDHR3-212ENST00000487084 POLEQ07864 2286 aa20.73■□□□□ 0.91
CDHR3-212ENST00000487084 WISP2O76076 250 aa20.73■□□□□ 0.91
CDHR3-212ENST00000487084 CT62P0C5K7 136 aa20.73■□□□□ 0.91
CDHR3-212ENST00000487084 RNF224P0DH78 156 aa20.73■□□□□ 0.91
CDHR3-212ENST00000487084 ALDH3A1P30838 453 aa20.73■□□□□ 0.91
CDHR3-212ENST00000487084 FAM180BQ6P0A1 224 aa20.73■□□□□ 0.91
CDHR3-212ENST00000487084 OPN5Q6U736 354 aa20.73■□□□□ 0.91
CDHR3-212ENST00000487084 CDC26Q8NHZ8 85 aa20.73■□□□□ 0.91
CDHR3-212ENST00000487084 SLC22A8Q8TCC7 542 aa20.73■□□□□ 0.91
CDHR3-212ENST00000487084 TMEM109Q9BVC6 243 aa20.73■□□□□ 0.91
CDHR3-212ENST00000487084 BRINP2Q9C0B6 783 aa20.73■□□□□ 0.91
CDHR3-212ENST00000487084 UTS2RQ9UKP6 389 aa20.73■□□□□ 0.91
CDHR3-212ENST00000487084 CES1P1Q9UKY3 287 aa20.73■□□□□ 0.91
CDHR3-212ENST00000487084 LRRTM2O43300 516 aa20.72■□□□□ 0.91
CDHR3-212ENST00000487084 ZNF354AO60765 605 aaPredicted RBP20.72■□□□□ 0.91
CDHR3-212ENST00000487084 UROSP10746 265 aa20.72■□□□□ 0.91
CDHR3-212ENST00000487084 CREB1P16220 341 aa20.72■□□□□ 0.91
CDHR3-212ENST00000487084 PTGER1P34995 402 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms