RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 MCM10Q7L590 875 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 ADCK1Q86TW2 530 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 KCNMB4Q86W47 210 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 LRRC17Q8N6Y2 441 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 CNNM3Q8NE01 707 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 C11orf45Q8TAV5 145 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 COG3Q96JB2 828 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 TAAR6Q96RI8 345 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 TNFRSF13CQ96RJ3 184 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 PYGO2Q9BRQ0 406 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 SYT11Q9BT88 431 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 RAB17Q9H0T7 212 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 SIRPDQ9H106 197 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 PARLQ9H300 379 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 WDR41Q9HAD4 459 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 IL1RAPQ9NPH3 570 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 ISY1Q9ULR0 285 aaKnown RBP3.8□□□□□ -1.8
SMC4-218ENST00000486711 MTF2Q9Y483 593 aaPredicted RBP3.8□□□□□ -1.8
SMC4-218ENST00000486711 PRSS21Q9Y6M0 314 aa3.8□□□□□ -1.8
SMC4-218ENST00000486711 FGD5Q6ZNL6 1462 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 KIF7Q2M1P5 1343 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 IGHV4-30-2A0A087WSY4 118 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 IGHV3-38A0A0C4DH36 116 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 A0A0U1RRA0 63 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 LOC390937A0A1W2PQ73 354 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 MEX3AA1L020 520 aaKnown RBP3.79□□□□□ -1.8
SMC4-218ENST00000486711 PDHXO00330 501 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 CFLARO15519 480 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 ZNF749O43361 778 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 DCXO43602 365 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 LRP3O75074 770 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 TGFAP01135 160 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 GSTA1P08263 222 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 RALAP11233 206 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 DPEP1P16444 411 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 TMOD1P28289 359 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 OXTRP30559 389 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 CAPGP40121 348 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 RIDAP52758 137 aaKnown RBP3.79□□□□□ -1.8
SMC4-218ENST00000486711 SLC26A5P58743 744 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 SRPXP78539 464 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 FKBP3Q00688 224 aaKnown RBP3.79□□□□□ -1.8
SMC4-218ENST00000486711 SLC17A1Q14916 467 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 SHROOM1Q2M3G4 852 aaPredicted RBP3.79□□□□□ -1.8
SMC4-218ENST00000486711 C2CD6Q53TS8 623 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 IL23RQ5VWK5 629 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 LIPJQ5W064 366 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 STXBP4Q6ZWJ1 553 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 YRDCQ86U90 279 aaKnown RBP3.79□□□□□ -1.8
SMC4-218ENST00000486711 LINC00518Q8N0U6 118 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 BANPQ8N9N5 519 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 MLKLQ8NB16 471 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 Q8NBF4 154 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 FBXO25Q8TCJ0 367 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.79□□□□□ -1.8
SMC4-218ENST00000486711 PHYHIPQ92561 330 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 GTF3AQ92664 365 aaKnown RBP3.79□□□□□ -1.8
SMC4-218ENST00000486711 C14orf79Q96F83 325 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 C16orf58Q96GQ5 468 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 SLC45A3Q96JT2 553 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 SAMD8Q96LT4 415 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 PRICKLE1Q96MT3 831 aaPredicted RBP3.79□□□□□ -1.8
SMC4-218ENST00000486711 CBWD1Q9BRT8 395 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 CXXC4Q9H2H0 198 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 TMEM231Q9H6L2 316 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 MOB1AQ9H8S9 216 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 SLC25A19Q9HC21 320 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 ACTR3BQ9P1U1 418 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 EIF3KQ9UBQ5 218 aaKnown RBP3.79□□□□□ -1.8
SMC4-218ENST00000486711 CLIP2Q9UDT6 1046 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 AUP1Q9Y679 476 aa3.79□□□□□ -1.8
SMC4-218ENST00000486711 UBE4BO95155 1302 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 TMEM89A2RUT3 159 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 IGLON5A6NGN9 336 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 SH2D1BO14796 132 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 TXNL1O43396 289 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 TSPAN2O60636 221 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 DUSP11O75319 330 aaKnown RBP3.78□□□□□ -1.8
SMC4-218ENST00000486711 FCER2P06734 321 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 GHRP10912 638 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 ZNF10P21506 573 aaPredicted RBP3.78□□□□□ -1.8
SMC4-218ENST00000486711 CALML3P27482 149 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 AKT2P31751 481 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 MATKP42679 507 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 MAGEA4P43358 317 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 MTIF2P46199 727 aaKnown RBP3.78□□□□□ -1.8
SMC4-218ENST00000486711 ZNF131P52739 623 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 RPS27AP62979 156 aaKnown RBP3.78□□□□□ -1.8
SMC4-218ENST00000486711 MYBPC1Q00872 1141 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 NFATC2Q13469 925 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 SNX1Q13596 522 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 KLF5Q13887 457 aaPredicted RBP3.78□□□□□ -1.8
SMC4-218ENST00000486711 ZNF146Q15072 292 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 INAQ16352 499 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 LPAL2Q16609 132 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 MUC21Q5SSG8 566 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 RAET1GQ6H3X3 334 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 IRGCQ6NXR0 463 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 STEAP1BQ6NZ63 245 aa3.78□□□□□ -1.8
SMC4-218ENST00000486711 ZNF613Q6PF04 617 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms