RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 RIT1Q92963 219 aa17.35■□□□□ 0.37
ABCF3-214ENST00000480562 SARAFQ96BY9 339 aa17.35■□□□□ 0.37
ABCF3-214ENST00000480562 PROK2Q9HC23 129 aa17.35■□□□□ 0.37
ABCF3-214ENST00000480562 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.35■□□□□ 0.37
ABCF3-214ENST00000480562 Q9UFV3 132 aa17.35■□□□□ 0.37
ABCF3-214ENST00000480562 TSC22D4Q9Y3Q8 395 aa17.35■□□□□ 0.37
ABCF3-214ENST00000480562 A0A096LPK6 155 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 A0A0A6YYD5 115 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 ESYT3A0FGR9 886 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 H0YIV9 168 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 SIX3O95343 332 aaPredicted RBP17.34■□□□□ 0.37
ABCF3-214ENST00000480562 FBXO45P0C2W1 286 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 NR2F6P10588 404 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 CASQ1P31415 396 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 ZFP36L2P47974 494 aaKnown RBP17.34■□□□□ 0.37
ABCF3-214ENST00000480562 PIK3CGP48736 1102 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 ALDH18A1P54886 795 aaKnown RBP17.34■□□□□ 0.37
ABCF3-214ENST00000480562 PHEXP78562 749 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 GTF2H2Q13888 395 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 UAP1Q16222 522 aaPredicted RBP17.34■□□□□ 0.37
ABCF3-214ENST00000480562 C1orf185Q5T7R7 199 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 WLSQ5T9L3 541 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 GTF2H2CQ6P1K8 395 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 CYP20A1Q6UW02 462 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 RNF111Q6ZNA4 994 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 LIX1LQ8IVB5 337 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 FBXW8Q8N3Y1 598 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 SLC15A4Q8N697 577 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 ANP32BQ92688 251 aaKnown RBP17.34■□□□□ 0.37
ABCF3-214ENST00000480562 REPS1Q96D71 796 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 JSRP1Q96MG2 331 aaPredicted RBP17.34■□□□□ 0.37
ABCF3-214ENST00000480562 ZNF559Q9BR84 538 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 WWTR1Q9GZV5 400 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 ZNF703Q9H7S9 590 aaPredicted RBP17.34■□□□□ 0.37
ABCF3-214ENST00000480562 DDX31Q9H8H2 851 aaKnown RBP17.34■□□□□ 0.37
ABCF3-214ENST00000480562 IPPKQ9H8X2 491 aa17.34■□□□□ 0.37
ABCF3-214ENST00000480562 LYARQ9NX58 379 aaKnown RBP17.34■□□□□ 0.37
ABCF3-214ENST00000480562 CPSF2Q9P2I0 782 aaKnown RBP17.34■□□□□ 0.37
ABCF3-214ENST00000480562 BOKQ9UMX3 212 aaPredicted RBP17.34■□□□□ 0.37
ABCF3-214ENST00000480562 C2CD3Q4AC94 2353 aa17.33■□□□□ 0.37
ABCF3-214ENST00000480562 A0A1W2PS29 197 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 LRRC3CA6NJW4 275 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 KLK8O60259 260 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 HCN1O60741 890 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 WDR1O75083 606 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 KLHL2O95198 593 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 AIFM1O95831 613 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 GBAP04062 536 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 CLPSP04118 112 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 FAM58BPP0C7Q3 252 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 SLC37A1P57057 533 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 SLC7A5Q01650 507 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 MYBPHQ13203 477 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 ACAP2Q15057 778 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 EBPQ15125 230 aaKnown RBP17.33■□□□□ 0.36
ABCF3-214ENST00000480562 PCBP2Q15366 365 aaKnown RBP eCLIP17.33■□□□□ 0.362e-6■■■■□ 23.1
ABCF3-214ENST00000480562 SPRED3Q2MJR0 410 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 TMEM64Q6YI46 380 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 CCDC91Q7Z6B0 441 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 TMEM200AQ86VY9 491 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 GPR78Q96P69 363 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 PELOQ9BRX2 385 aaKnown RBP17.33■□□□□ 0.36
ABCF3-214ENST00000480562 SLC6A15Q9H2J7 730 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 ZFP64Q9NPA5 681 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 CHCHD2Q9Y6H1 151 aaPredicted RBP17.33■□□□□ 0.36
ABCF3-214ENST00000480562 NCKAP5O14513 1909 aa17.33■□□□□ 0.36
ABCF3-214ENST00000480562 UGDHO60701 494 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 SERPINB3P29508 390 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 SSTR4P31391 388 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 TRPC1P48995 793 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 ARFIP1P53367 373 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 CUL3Q13618 768 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 UBAP2Q5T6F2 1119 aaKnown RBP17.32■□□□□ 0.36
ABCF3-214ENST00000480562 SYT10Q6XYQ8 523 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 CLYBLQ8N0X4 340 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 WDR20Q8TBZ3 569 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 CDK15Q96Q40 435 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 VPS11Q9H270 941 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 CNIH4Q9P003 139 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 KCNN3Q9UGI6 736 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 CNOT11Q9UKZ1 510 aaKnown RBP17.32■□□□□ 0.36
ABCF3-214ENST00000480562 MED13LQ71F56 2210 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 NINQ8N4C6 2090 aa17.32■□□□□ 0.36
ABCF3-214ENST00000480562 OR7A17O14581 309 aa17.31■□□□□ 0.36
ABCF3-214ENST00000480562 PGRMC2O15173 223 aa17.31■□□□□ 0.36
ABCF3-214ENST00000480562 ALDOAP04075 364 aaKnown RBP17.31■□□□□ 0.36
ABCF3-214ENST00000480562 SLC35E2P0CK97 266 aa17.31■□□□□ 0.36
ABCF3-214ENST00000480562 TYK2P29597 1187 aa17.31■□□□□ 0.36
ABCF3-214ENST00000480562 ARL1P40616 181 aaPredicted RBP17.31■□□□□ 0.36
ABCF3-214ENST00000480562 DLX5P56178 289 aa17.31■□□□□ 0.36
ABCF3-214ENST00000480562 RIPPLY3P57055 190 aa17.31■□□□□ 0.36
ABCF3-214ENST00000480562 TBL3Q12788 808 aaKnown RBP17.31■□□□□ 0.36
ABCF3-214ENST00000480562 KLC3Q6P597 504 aa17.31■□□□□ 0.36
ABCF3-214ENST00000480562 SPNS3Q6ZMD2 512 aa17.31■□□□□ 0.36
ABCF3-214ENST00000480562 NUDT13Q86X67 352 aa17.31■□□□□ 0.36
ABCF3-214ENST00000480562 DND1Q8IYX4 353 aaKnown RBP17.31■□□□□ 0.36
ABCF3-214ENST00000480562 PLD6Q8N2A8 252 aaKnown RBP17.31■□□□□ 0.36
ABCF3-214ENST00000480562 LRRC25Q8N386 305 aaPredicted RBP17.31■□□□□ 0.36
ABCF3-214ENST00000480562 PTGR2Q8N8N7 351 aaPredicted RBP17.31■□□□□ 0.36
ABCF3-214ENST00000480562 L3MBTL4Q8NA19 623 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms