RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TUBA3EQ6PEY2 450 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 ZCCHC23Q6ZST2 131 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 OR4N5Q8IXE1 308 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 LRRC34Q8IZ02 419 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 BEST3Q8N1M1 668 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 KIF2BQ8N4N8 673 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 SLC15A4Q8N697 577 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 OR7G1Q8NGA0 311 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 PPP1R14CQ8TAE6 165 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 SUN3Q8TAQ9 357 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 TWIST2Q8WVJ9 160 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 MIB2Q96AX9 1013 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 ZNF681Q96N22 645 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 LRTM1Q9HBL6 345 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 MYOTQ9UBF9 498 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 RAP2CQ9Y3L5 183 aa14.39□□□□□ -0.11
C9orf3-217ENST00000479161 ESPL1Q14674 2120 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 TENM4Q6N022 2769 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 GLOD5A6NK44 160 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 GABRR3A8MPY1 467 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 DYNC1I1O14576 645 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 LSM1O15116 133 aaKnown RBP14.38□□□□□ -0.11
C9orf3-217ENST00000479161 TBX19O60806 448 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 PRAMEF2O60811 474 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 PRKRAO75569 313 aaKnown RBP14.38□□□□□ -0.11
C9orf3-217ENST00000479161 SLITRK5O94991 958 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 IFI6P09912 130 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 PCSK2P16519 638 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 DDCP20711 480 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 CD96P40200 585 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 CYB561P49447 251 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 HLCSP50747 726 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 WDR4P57081 412 aaKnown RBP14.38□□□□□ -0.11
C9orf3-217ENST00000479161 MAGOHP61326 146 aaKnown RBP14.38□□□□□ -0.11
C9orf3-217ENST00000479161 RNF4P78317 190 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 ID2Q02363 134 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 INPP5JQ15735 1006 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-217ENST00000479161 CHI3L2Q15782 390 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 SH2D4BQ5SQS7 431 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 FAM71E1Q6IPT2 247 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 SCIMPQ6UWF3 145 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 TRIM42Q8IWZ5 723 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 MDS2Q8NDY4 140 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 C17orf47Q8NEP4 570 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 CTHRC1Q96CG8 243 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 PPP3R2Q96LZ3 170 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 SH3GL2Q99962 352 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 MFRPQ9BY79 579 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 OR8D2Q9GZM6 311 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 ZNF639Q9UID6 485 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 ZDHHC2Q9UIJ5 367 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 CSAG2Q9Y5P2 127 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 ZNF780BQ9Y6R6 833 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 SVILO95425 2214 aa14.38□□□□□ -0.11
C9orf3-217ENST00000479161 UBR5O95071 2799 aaPredicted RBP14.38□□□□□ -0.11
C9orf3-217ENST00000479161 WASHC1A8K0Z3 465 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 SEC22BO75396 215 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 IL3P08700 152 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 SLC37A1P57057 533 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 HHATQ5VTY9 493 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 GALNT12Q8IXK2 581 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 DND1Q8IYX4 353 aaKnown RBP14.37□□□□□ -0.11
C9orf3-217ENST00000479161 AMER2Q8N7J2 671 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 GALNT11Q8NCW6 608 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 CATSPER1Q8NEC5 780 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 DNAJB8Q8NHS0 232 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 CPT1CQ8TCG5 803 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 ZNF675Q8TD23 568 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 UCN3Q969E3 161 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 TP53INP1Q96A56 240 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 CNRIP1Q96F85 164 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-217ENST00000479161 SCMH1Q96GD3 660 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.37□□□□□ -0.112e-7■■■■□ 20.8
C9orf3-217ENST00000479161 SLC35C2Q9NQQ7 365 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 AGPAT4Q9NRZ5 378 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 NKIRAS1Q9NYS0 192 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 PLA2G3Q9NZ20 509 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 HEY2Q9UBP5 337 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 UTS2RQ9UKP6 389 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 CFL2Q9Y281 166 aa14.37□□□□□ -0.11
C9orf3-217ENST00000479161 KLF11O14901 512 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 RRP9O43818 475 aaKnown RBP14.36□□□□□ -0.11
C9orf3-217ENST00000479161 ITGA10O75578 1167 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 BCAS2O75934 225 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-217ENST00000479161 NEURL1O76050 574 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 HSPA4LO95757 839 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 CD46P15529 392 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 S1PR1P21453 382 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 MPIP34949 423 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 ASMTP46597 345 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 SLC1A6P48664 564 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 RPL14P50914 215 aaKnown RBP14.36□□□□□ -0.11
C9orf3-217ENST00000479161 HK2P52789 917 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 BTKQ06187 659 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 STX3Q13277 289 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 NR6A1Q15406 480 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 PRICKLE4Q2TBC4 344 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 RFTN2Q52LD8 501 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-217ENST00000479161 PIGGQ5H8A4 983 aa14.36□□□□□ -0.11
C9orf3-217ENST00000479161 CES4AQ5XG92 561 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms