RNA–Protein interactions for RNA: ENST00000478336.5

ARF1-208, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 930 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-208ENST00000478336 FCRL1Q96LA6 429 aa22.29■■□□□ 1.16
ARF1-208ENST00000478336 UTP23Q9BRU9 249 aaKnown RBP22.29■■□□□ 1.16
ARF1-208ENST00000478336 LRTM1Q9HBL6 345 aa22.29■■□□□ 1.16
ARF1-208ENST00000478336 C1orf109Q9NX04 203 aa22.29■■□□□ 1.16
ARF1-208ENST00000478336 COPS7AQ9UBW8 275 aa22.29■■□□□ 1.16
ARF1-208ENST00000478336 RP1L1Q8IWN7 2480 aaPredicted RBP22.29■■□□□ 1.16
ARF1-208ENST00000478336 GCN1Q92616 2671 aaKnown RBP22.28■■□□□ 1.16
ARF1-208ENST00000478336 HSPA4LO95757 839 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 GRK2P25098 689 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 TRHRP34981 398 aaPredicted RBP22.28■■□□□ 1.16
ARF1-208ENST00000478336 CD96P40200 585 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 ALDH9A1P49189 494 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 ABCE1P61221 599 aaKnown RBP22.28■■□□□ 1.16
ARF1-208ENST00000478336 ERVK-8P63133 956 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 NR6A1Q15406 480 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 ZNF750Q32MQ0 723 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 XKR7Q5GH72 579 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 ZNF468Q5VIY5 522 aaPredicted RBP22.28■■□□□ 1.16
ARF1-208ENST00000478336 HHATQ5VTY9 493 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 NOXRED1Q6NXP6 359 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 HDXQ7Z353 690 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 DDIASQ8IXT1 998 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 MDS2Q8NDY4 140 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 CPT1CQ8TCG5 803 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 THAP3Q8WTV1 239 aaPredicted RBP22.28■■□□□ 1.16
ARF1-208ENST00000478336 MIB2Q96AX9 1013 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 C20orf27Q9GZN8 174 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.28■■□□□ 1.166e-8■■■□□ 18.7
ARF1-208ENST00000478336 ZNF395Q9H8N7 513 aaPredicted RBP22.28■■□□□ 1.16
ARF1-208ENST00000478336 CXorf21Q9HAI6 301 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 MYNNQ9NPC7 610 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 PSME2Q9UL46 239 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 ERVK-19Q9WJR5 959 aa22.28■■□□□ 1.16
ARF1-208ENST00000478336 PRRC2CQ9Y520 2896 aaKnown RBP22.27■■□□□ 1.16
ARF1-208ENST00000478336 J3QKU1 62 aa22.27■■□□□ 1.16
ARF1-208ENST00000478336 LSM1O15116 133 aaKnown RBP22.27■■□□□ 1.16
ARF1-208ENST00000478336 SEC22BO75396 215 aa22.27■■□□□ 1.16
ARF1-208ENST00000478336 ERAL1O75616 437 aaKnown RBP22.27■■□□□ 1.16
ARF1-208ENST00000478336 PORP16435 677 aaPredicted RBP22.27■■□□□ 1.16
ARF1-208ENST00000478336 ST13P50502 369 aaKnown RBP22.27■■□□□ 1.16
ARF1-208ENST00000478336 RNF4P78317 190 aa22.27■■□□□ 1.16
ARF1-208ENST00000478336 ZNF267Q14586 743 aaPredicted RBP22.27■■□□□ 1.16
ARF1-208ENST00000478336 HEPACAMQ14CZ8 416 aa22.27■■□□□ 1.16
ARF1-208ENST00000478336 RPUSD3Q6P087 351 aaKnown RBP22.27■■□□□ 1.16
ARF1-208ENST00000478336 GALNT12Q8IXK2 581 aa22.27■■□□□ 1.16
ARF1-208ENST00000478336 DOK4Q8TEW6 326 aa22.27■■□□□ 1.16
ARF1-208ENST00000478336 CNRIP1Q96F85 164 aaPredicted RBP22.27■■□□□ 1.16
ARF1-208ENST00000478336 ZNF681Q96N22 645 aa22.27■■□□□ 1.16
ARF1-208ENST00000478336 CNPPD1Q9BV87 410 aa22.27■■□□□ 1.16
ARF1-208ENST00000478336 TRIM45Q9H8W5 580 aaPredicted RBP22.27■■□□□ 1.16
ARF1-208ENST00000478336 VIPAS39Q9H9C1 493 aa22.27■■□□□ 1.16
ARF1-208ENST00000478336 ANKRD10Q9NXR5 420 aa22.27■■□□□ 1.16
ARF1-208ENST00000478336 EHD3Q9NZN3 535 aa22.27■■□□□ 1.16
ARF1-208ENST00000478336 UTS2RQ9UKP6 389 aa22.27■■□□□ 1.16
ARF1-208ENST00000478336 WBP11Q9Y2W2 641 aaKnown RBP22.27■■□□□ 1.16
ARF1-208ENST00000478336 MYO18BQ8IUG5 2567 aa22.27■■□□□ 1.16
ARF1-208ENST00000478336 FCHO1O14526 889 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 PRAMEF2O60811 474 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 ITGA10O75578 1167 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 SNUPNO95149 360 aaKnown RBP22.26■■□□□ 1.15
ARF1-208ENST00000478336 CLPSP04118 112 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 ATP1B1P05026 303 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 CSNK2A2P19784 350 aaPredicted RBP22.26■■□□□ 1.15
ARF1-208ENST00000478336 HK2P52789 917 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 FOXK1P85037 733 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 DUSP2Q05923 314 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 OR1C1Q15619 314 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 FAM71E1Q6IPT2 247 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 C9orf40Q8IXQ3 194 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 CISD2Q8N5K1 135 aaKnown RBP22.26■■□□□ 1.15
ARF1-208ENST00000478336 SNRNP40Q96DI7 357 aaKnown RBP22.26■■□□□ 1.15
ARF1-208ENST00000478336 SIGLEC12Q96PQ1 595 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 SORT1Q99523 831 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 PAIP2Q9BPZ3 127 aaKnown RBP22.26■■□□□ 1.15
ARF1-208ENST00000478336 MYOTQ9UBF9 498 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 HAO1Q9UJM8 370 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 NTNG1Q9Y2I2 539 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 CROCCQ5TZA2 2017 aa22.26■■□□□ 1.15
ARF1-208ENST00000478336 PYCARD-AS1I3L0S3 204 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 NEURL1O76050 574 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 CT62P0C5K7 136 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 DDCP20711 480 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 TACR1P25103 407 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 FEN1P39748 380 aaKnown RBP22.25■■□□□ 1.15
ARF1-208ENST00000478336 SLC1A6P48664 564 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 HLCSP50747 726 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 RPL38P63173 70 aaKnown RBP22.25■■□□□ 1.15
ARF1-208ENST00000478336 OC90Q02509 493 aaPredicted RBP22.25■■□□□ 1.15
ARF1-208ENST00000478336 RFTN2Q52LD8 501 aaPredicted RBP22.25■■□□□ 1.15
ARF1-208ENST00000478336 C16orf47Q6ZP98 133 aaPredicted RBP22.25■■□□□ 1.15
ARF1-208ENST00000478336 IKBIPQ70UQ0 350 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 ZNF781Q8N8C0 355 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 OR5L2Q8NGL0 311 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 SUN3Q8TAQ9 357 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 NUBPLQ8TB37 319 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 MGARPQ8TDB4 240 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 CCT7Q99832 543 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 SH3GL2Q99962 352 aa22.25■■□□□ 1.15
ARF1-208ENST00000478336 LIN28AQ9H9Z2 209 aaKnown RBP22.25■■□□□ 1.15
ARF1-208ENST00000478336 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.25■■□□□ 1.153e-6■■■□□ 15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms