RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 TREX1Q9NSU2 369 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 C14orf105Q9NVL8 296 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 ZIM2Q9NZV7 527 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 HCN3Q9P1Z3 774 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 TAC3Q9UHF0 121 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 PCYOX1Q9UHG3 505 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 RIMKLBQ9ULI2 386 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 PACSIN2Q9UNF0 486 aaPredicted RBP4.27□□□□□ -1.73
CKS1B-207ENST00000477676 RNF6Q9Y252 685 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 RPH3AQ9Y2J0 694 aaPredicted RBP4.27□□□□□ -1.73
CKS1B-207ENST00000477676 MED16Q9Y2X0 877 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 PCDHA13Q9Y5I0 950 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 FAM169AQ9Y6X4 670 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 HIVEP2P31629 2446 aa4.27□□□□□ -1.73
CKS1B-207ENST00000477676 YLPM1P49750 1951 aaKnown RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 A0A0G2JMM0 328 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 A0A1B0GTH9 108 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 A0A1W2PPB8 328 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 A0A1W2PRS3 328 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 FEZF1A0PJY2 475 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 CCDC151A5D8V7 595 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 PINLYPA6NC86 204 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 ZNF860A6NHJ4 632 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 MARCH11A6NNE9 402 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 KIR3DP1A8MWS1 328 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 GOLGA8KD6RF30 607 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 E7ENX8 843 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 GOLGA8TH3BQL2 631 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 CD3EAPO15446 510 aaKnown RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 TTI1O43156 1089 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 AKAP10O43572 662 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 NME2P1O60361 137 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 RDH16O75452 317 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 PSIP1O75475 530 aaKnown RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 SNUPNO95149 360 aaKnown RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 GPANK1O95872 356 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 SLC16A8O95907 504 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 RPN2P04844 631 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 APOA4P06727 396 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 ZSCAN5DPP0CG00 497 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 ERVK-10P10266 1014 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 CD99P14209 185 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 CD1EP15812 388 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 ABOP16442 354 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 IL1RNP18510 177 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 KLK2P20151 261 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 RPS3P23396 243 aaKnown RBP eCLIP4.26□□□□□ -1.733e-8■■■■■ 30.3
CKS1B-207ENST00000477676 ADRA1DP25100 572 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 CMPK1P30085 196 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 COILP38432 576 aaPredicted RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 XCR1P46094 333 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 EIF3BP55884 814 aaKnown RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 SESN3P58005 492 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 SLC26A5P58743 744 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 RAP2BP61225 183 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 TIAL1Q01085 375 aaKnown RBP eCLIP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 TAP2Q03519 686 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 RELAQ04206 551 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 RBPJQ06330 500 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 CDH17Q12864 832 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 FOXD4Q12950 439 aaPredicted RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 SNTB1Q13884 538 aaKnown RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 MEP1AQ16819 746 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 KLHL38Q2WGJ6 581 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 FASTKD1Q53R41 847 aaKnown RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 SFT2D3Q587I9 215 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 GARNL3Q5VVW2 1013 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 SLC25A25Q6KCM7 469 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 PAPD4Q6PIY7 484 aaKnown RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 CES3Q6UWW8 571 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 CYHR1Q6ZMK1 362 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 TGIF2LYQ8IUE0 185 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 LIX1LQ8IVB5 337 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 GHDCQ8N2G8 530 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 DNAAF3Q8N9W5 541 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 PLPP5Q8NEB5 264 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 NFAM1Q8NET5 270 aaPredicted RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 OR5T3Q8NGG3 340 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 OR51Q1Q8NH59 317 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 LILRB4Q8NHJ6 448 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 FAM57AQ8TBR7 257 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 M1APQ8TC57 530 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 ACTRT2Q8TDY3 377 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 ELP5Q8TE02 316 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 SMPDL3AQ92484 453 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 LPGAT1Q92604 370 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 TM4SF19Q96DZ7 209 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 PTCD3Q96EY7 689 aaKnown RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 VPS50Q96JG6 964 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 ZNF354BQ96LW1 612 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 PRAP1Q96NZ9 151 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 SMR3AQ99954 134 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 UTP23Q9BRU9 249 aaKnown RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 RAB11FIP5Q9BXF6 653 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 AICDAQ9GZX7 198 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 CDCP1Q9H5V8 836 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 TRIM45Q9H8W5 580 aaPredicted RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 KCNK13Q9HB14 408 aa4.26□□□□□ -1.73
CKS1B-207ENST00000477676 MRPS30Q9NP92 439 aaKnown RBP4.26□□□□□ -1.73
CKS1B-207ENST00000477676 MMP25Q9NPA2 562 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms