RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 GALNSP34059 522 aa19.6■□□□□ 0.73
LIME1-204ENST00000476183 MEOX1P50221 254 aa19.6■□□□□ 0.73
LIME1-204ENST00000476183 NAGLUP54802 743 aa19.6■□□□□ 0.73
LIME1-204ENST00000476183 GPR85P60893 370 aa19.6■□□□□ 0.73
LIME1-204ENST00000476183 CSTF3Q12996 717 aaKnown RBP19.6■□□□□ 0.73
LIME1-204ENST00000476183 SCIMPQ6UWF3 145 aa19.6■□□□□ 0.73
LIME1-204ENST00000476183 FRMD7Q6ZUT3 714 aa19.6■□□□□ 0.73
LIME1-204ENST00000476183 GPALPP1Q8IXQ4 340 aa19.6■□□□□ 0.73
LIME1-204ENST00000476183 NUBPLQ8TB37 319 aa19.6■□□□□ 0.73
LIME1-204ENST00000476183 MID1IP1Q9NPA3 183 aa19.6■□□□□ 0.73
LIME1-204ENST00000476183 DEPPQ9NTK1 212 aa19.6■□□□□ 0.73
LIME1-204ENST00000476183 NMRK1Q9NWW6 199 aa19.6■□□□□ 0.73
LIME1-204ENST00000476183 NPIPA1Q9UND3 350 aa19.6■□□□□ 0.73
LIME1-204ENST00000476183 ERVK-11Q9UQG0 969 aa19.6■□□□□ 0.73
LIME1-204ENST00000476183 CROCCQ5TZA2 2017 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 MAST4O15021 2626 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 DYRK3O43781 588 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 PEX1O43933 1283 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 CT62P0C5K7 136 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 CPA3P15088 417 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 PIK3R1P27986 724 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 RFC3P40938 356 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 XKP51811 444 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 SLC37A1P57057 533 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 DNAJB13P59910 316 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 RAE1P78406 368 aaKnown RBP19.59■□□□□ 0.73
LIME1-204ENST00000476183 HMGCS1Q01581 520 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 ASPHQ12797 758 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 PIGGQ5H8A4 983 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 EMBQ6PCB8 327 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 PSD4Q8NDX1 1056 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 OR4K14Q8NGD5 310 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 ART5Q96L15 291 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 CXorf21Q9HAI6 301 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 TNFRSF12AQ9NP84 129 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 TIMMDC1Q9NPL8 285 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 OXSMQ9NWU1 459 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 NAV2Q8IVL1 2488 aa19.59■□□□□ 0.73
LIME1-204ENST00000476183 GTF3C1Q12789 2109 aa19.58■□□□□ 0.73
LIME1-204ENST00000476183 A1L4Q6 167 aa19.58■□□□□ 0.72
LIME1-204ENST00000476183 NADKO95544 446 aaPredicted RBP19.58■□□□□ 0.72
LIME1-204ENST00000476183 ZNF24P17028 368 aa19.58■□□□□ 0.72
LIME1-204ENST00000476183 MPEG1Q2M385 716 aa19.58■□□□□ 0.72
LIME1-204ENST00000476183 HIST2H2BCQ6DN03 193 aa19.58■□□□□ 0.72
LIME1-204ENST00000476183 SLC48A1Q6P1K1 146 aa19.58■□□□□ 0.72
LIME1-204ENST00000476183 TRABD2AQ86V40 505 aa19.58■□□□□ 0.72
LIME1-204ENST00000476183 FJX1Q86VR8 437 aa19.58■□□□□ 0.72
LIME1-204ENST00000476183 GBP7Q8N8V2 638 aaPredicted RBP19.58■□□□□ 0.72
LIME1-204ENST00000476183 CCDC63Q8NA47 563 aa19.58■□□□□ 0.72
LIME1-204ENST00000476183 RDH11Q8TC12 318 aa19.58■□□□□ 0.72
LIME1-204ENST00000476183 CAVIN3Q969G5 261 aa19.58■□□□□ 0.72
LIME1-204ENST00000476183 APIPQ96GX9 242 aa19.58■□□□□ 0.72
LIME1-204ENST00000476183 PLEKHB1Q9UF11 243 aaPredicted RBP19.58■□□□□ 0.72
LIME1-204ENST00000476183 LGALS13Q9UHV8 139 aa19.58■□□□□ 0.72
LIME1-204ENST00000476183 PCNX1Q96RV3 2341 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 A0A0G2JMM0 328 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 A0A1W2PPB8 328 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 A0A1W2PRS3 328 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 C1orf226A1L170 272 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 PINLYPA6NC86 204 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 KIR3DP1A8MWS1 328 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 KLRC4-KLRK1H3BQV0 150 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 ZNHIT1O43257 154 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 GUCY1B2O75343 617 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 CPMP14384 443 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 SSTR4P31391 388 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 EBPQ15125 230 aaKnown RBP19.57■□□□□ 0.72
LIME1-204ENST00000476183 ERCC6LQ2NKX8 1250 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 KRTCAP3Q53RY4 240 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 LYPD8Q6UX82 237 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 RNF111Q6ZNA4 994 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 C10orf107Q8IVU9 208 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 CHERPQ8IWX8 916 aaKnown RBP19.57■□□□□ 0.72
LIME1-204ENST00000476183 RIBC1Q8N443 379 aaPredicted RBP19.57■□□□□ 0.72
LIME1-204ENST00000476183 BANPQ8N9N5 519 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 ZFP62Q8NB50 900 aaPredicted RBP19.57■□□□□ 0.72
LIME1-204ENST00000476183 POGLUT1Q8NBL1 392 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 RELTQ969Z4 430 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 WWTR1Q9GZV5 400 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 MKS1Q9NXB0 559 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 HEY2Q9UBP5 337 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 MCM8Q9UJA3 840 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 PLLPQ9Y342 182 aa19.57■□□□□ 0.72
LIME1-204ENST00000476183 TRGV8A0A0C4DH27 118 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 A0A1B0GUH1 482 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 SERTM1A2A2V5 107 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 ESPNB1AK53 854 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 G3V3Y1 287 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 ASNA1O43681 348 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 CLDN1O95832 211 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 SERPINB3P29508 390 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 PTGER1P34995 402 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 TRA2BP62995 288 aaKnown RBP19.56■□□□□ 0.72
LIME1-204ENST00000476183 HSF1Q00613 529 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 DUSP2Q05923 314 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 FUT7Q11130 342 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 PCLAFQ15004 111 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 CFAP157Q5JU67 520 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 LIPMQ5VYY2 423 aa19.56■□□□□ 0.72
LIME1-204ENST00000476183 FAM180BQ6P0A1 224 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms