RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 NTSP30990 170 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 HNRNPH1P31943 449 aaKnown RBP6.62□□□□□ -1.35
SHQ1-207ENST00000475558 GALNSP34059 522 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 FRKP42685 505 aaPredicted RBP6.62□□□□□ -1.35
SHQ1-207ENST00000475558 NME5P56597 212 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 HSD17B7P56937 341 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 YBX1P67809 324 aaKnown RBP6.62□□□□□ -1.35
SHQ1-207ENST00000475558 CCL7P80098 99 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 RBBP4Q09028 425 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 ABHD18Q0P651 414 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 FADDQ13158 208 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 TP53BP2Q13625 1128 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 SERTAD2Q14140 314 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 ELOAQ14241 798 aaKnown RBP6.62□□□□□ -1.35
SHQ1-207ENST00000475558 TGIF1Q15583 401 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 CEBPEQ15744 281 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 UGT8Q16880 541 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 HKDC1Q2TB90 917 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 PIGGQ5H8A4 983 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 SPANXN4Q5MJ08 99 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 C6orf10Q5SRN2 563 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 OR52E8Q6IFG1 317 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 SLC48A1Q6P1K1 146 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 C8orf82Q6P1X6 216 aaPredicted RBP6.62□□□□□ -1.35
SHQ1-207ENST00000475558 ZFP1Q6P2D0 407 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 ZCCHC12Q6PEW1 402 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 DLEU7Q6UYE1 221 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 DHDDSQ86SQ9 333 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 SERPINA11Q86U17 422 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 TICAM1Q8IUC6 712 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 PLD3Q8IV08 490 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 SLC15A3Q8IY34 581 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 ULK2Q8IYT8 1036 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 OR4N4Q8N0Y3 316 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 OR52E4Q8NGH9 312 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 OR9I1Q8NGQ6 314 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 PSMA8Q8TAA3 256 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 PMM1Q92871 262 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 VPS33AQ96AX1 596 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 RBM18Q96H35 190 aaKnown RBP6.62□□□□□ -1.35
SHQ1-207ENST00000475558 EGLN2Q96KS0 407 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 MARK4Q96L34 752 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 TEX37Q96LM6 180 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 LRGUKQ96M69 825 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 ANKRD27Q96NW4 1050 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 TEFMQ96QE5 360 aaKnown RBP6.62□□□□□ -1.35
SHQ1-207ENST00000475558 OR1F2PQ96R84 312 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 NPAS2Q99743 824 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 CMKLR1Q99788 373 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 EFHD1Q9BUP0 239 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 ZNF717Q9BY31 904 aaPredicted RBP6.62□□□□□ -1.35
SHQ1-207ENST00000475558 SLC7A5P2Q9GIP4 190 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 SLC25A18Q9H1K4 315 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 KLHL31Q9H511 634 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 RPF2Q9H7B2 306 aaKnown RBP6.62□□□□□ -1.35
SHQ1-207ENST00000475558 SYNDIG1Q9H7V2 258 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 YY1AP1Q9H869 796 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 C3orf14Q9HBI5 128 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 FBXO8Q9NRD0 319 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 ABCD2Q9UBJ2 740 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.62□□□□□ -1.35
SHQ1-207ENST00000475558 GIMAP2Q9UG22 337 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 UTS2RQ9UKP6 389 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 RARRES3Q9UL19 164 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 ENTPD4Q9Y227 616 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 PCDHGB3Q9Y5G1 929 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 NBASA2RRP1 2371 aa6.62□□□□□ -1.35
SHQ1-207ENST00000475558 AQP12BA6NM10 295 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 MYO1GB0I1T2 1018 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 B4E171 279 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 CLIC1O00299 241 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 PLOD2O00469 737 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 SCN2BO60939 215 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 LRATO95237 230 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 GPR75O95800 540 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 ALBP02768 609 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 IL3P08700 152 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 SLC35E2P0CK97 266 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 NR2F6P10588 404 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 GP1BBP13224 206 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 PORP16435 677 aaPredicted RBP6.61□□□□□ -1.35
SHQ1-207ENST00000475558 AGXTP21549 392 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 SLC6A2P23975 617 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 CCKBRP32239 447 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 TSPAN7P41732 249 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 ZFP36L2P47974 494 aaKnown RBP6.61□□□□□ -1.35
SHQ1-207ENST00000475558 CPA2P48052 419 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 GABRA4P48169 554 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 XKP51811 444 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 DGKQP52824 942 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 PDX1P52945 283 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 LIM2P55344 173 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 RAB38P57729 211 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 RAB15P59190 212 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 RAB8AP61006 207 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 PSPHP78330 225 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 PRR5P85299 388 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 TLE1Q04724 770 aa6.61□□□□□ -1.35
SHQ1-207ENST00000475558 ZFP36L1Q07352 338 aaKnown RBP6.61□□□□□ -1.35
SHQ1-207ENST00000475558 VEZF1Q14119 521 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms