RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 ZDBF2Q9HCK1 2354 aa16.96■□□□□ 0.31
VARS2-206ENST00000473916 URADA6NGE7 173 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 LILRA5A6NI73 299 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 SMIM18P0DKX4 95 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 FUT4P22083 530 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 ALDH4A1P30038 563 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 BUD31P41223 144 aaPredicted RBP16.96■□□□□ 0.3
VARS2-206ENST00000473916 YAP1P46937 504 aaKnown RBP16.96■□□□□ 0.3
VARS2-206ENST00000473916 PPP2R2BQ00005 443 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 LASP1Q14847 261 aaKnown RBP16.96■□□□□ 0.3
VARS2-206ENST00000473916 CEBPEQ15744 281 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 C14orf28Q4W4Y0 310 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 REEP3Q6NUK4 255 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 WDR53Q7Z5U6 358 aaPredicted RBP16.96■□□□□ 0.3
VARS2-206ENST00000473916 HMGN2P46Q86SG4 172 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 SLC25A45Q8N413 288 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 OR5K1Q8NHB7 308 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 TBC1D20Q96BZ9 403 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 OSBPL10Q9BXB5 764 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 FSCN3Q9NQT6 498 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 BATF3Q9NR55 127 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 TRPC4Q9UBN4 977 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 KLHL3Q9UH77 587 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 SLC22A7Q9Y694 548 aa16.96■□□□□ 0.3
VARS2-206ENST00000473916 A6NHS1 94 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 ZSCAN9O15535 394 aaPredicted RBP16.95■□□□□ 0.3
VARS2-206ENST00000473916 LDB3O75112 727 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 RECKO95980 971 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 HMGN2P05204 90 aaKnown RBP16.95■□□□□ 0.3
VARS2-206ENST00000473916 SHC2P98077 582 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 ZXDAP98168 799 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 CRB2Q5IJ48 1285 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 WDR45BQ5MNZ6 344 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 OGFOD3Q6PK18 319 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 MCATQ8IVS2 390 aaKnown RBP16.95■□□□□ 0.3
VARS2-206ENST00000473916 ARHGEF39Q8N4T4 335 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 COL26A1Q96A83 441 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 EQTNQ9NQ60 294 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 PHF11Q9UIL8 331 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 KCNE3Q9Y6H6 103 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 ZNF780BQ9Y6R6 833 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 WDR87Q6ZQQ6 2873 aa16.95■□□□□ 0.3
VARS2-206ENST00000473916 ADAMTS9Q9P2N4 1935 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 IGHV5-51A0A0C4DH38 117 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 GALR3O60755 368 aaPredicted RBP16.94■□□□□ 0.3
VARS2-206ENST00000473916 RDH16O75452 317 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 MATN1P21941 496 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 DHPSP49366 369 aaPredicted RBP16.94■□□□□ 0.3
VARS2-206ENST00000473916 FUT5Q11128 374 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 DUSP7Q16829 419 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 SVOPLQ8N434 492 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 DHRSXQ8N5I4 330 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 OR9A4Q8NGU2 314 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 XAGE5Q8WWM1 108 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 POP5Q969H6 163 aaKnown RBP16.94■□□□□ 0.3
VARS2-206ENST00000473916 SDCCAG3Q96C92 435 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 ELP4Q96EB1 424 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 MBOAT4Q96T53 435 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 ROGDIQ9GZN7 287 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 TOR3AQ9H497 397 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 RUBCNLQ9H714 662 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 UCK1Q9HA47 277 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 C8orf4Q9NR00 106 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 NDUFAF4Q9P032 175 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 J3KTA2 159 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 HS6ST1O60243 411 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 MITFO75030 526 aaPredicted RBP16.94■□□□□ 0.3
VARS2-206ENST00000473916 PGM3O95394 542 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 GIMD1P0DJR0 217 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 THRBP10828 461 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 MPIP34949 423 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 SOX18P35713 384 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 CAPGP40121 348 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 XKP51811 444 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 ITGA1P56199 1179 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 ADARB1P78563 741 aaKnown RBP16.94■□□□□ 0.3
VARS2-206ENST00000473916 SHBQ15464 509 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 FAM111BQ6SJ93 734 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 TMEM64Q6YI46 380 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 CA13Q8N1Q1 262 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 DNAJC22Q8N4W6 341 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 OR7G2Q8NG99 324 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 NCSTNQ92542 709 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 RBCK1Q9BYM8 510 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 SEMA3GQ9NS98 782 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 GIMAP4Q9NUV9 329 aa16.94■□□□□ 0.3
VARS2-206ENST00000473916 TMEFF2Q9UIK5 374 aaPredicted RBP16.94■□□□□ 0.3
VARS2-206ENST00000473916 C5orf58C9J3I9 102 aa16.93■□□□□ 0.3
VARS2-206ENST00000473916 SLC28A2O43868 658 aa16.93■□□□□ 0.3
VARS2-206ENST00000473916 SEC24DO94855 1032 aaPredicted RBP16.93■□□□□ 0.3
VARS2-206ENST00000473916 PIGAP37287 484 aa16.93■□□□□ 0.3
VARS2-206ENST00000473916 OR1D5P58170 312 aa16.93■□□□□ 0.3
VARS2-206ENST00000473916 C6orf132Q5T0Z8 1188 aa16.93■□□□□ 0.3
VARS2-206ENST00000473916 KRT80Q6KB66 452 aa16.93■□□□□ 0.3
VARS2-206ENST00000473916 KLHL35Q6PF15 583 aa16.93■□□□□ 0.3
VARS2-206ENST00000473916 SHQ1Q6PI26 577 aaKnown RBP16.93■□□□□ 0.3
VARS2-206ENST00000473916 PIWIL3Q7Z3Z3 882 aaKnown RBP16.93■□□□□ 0.3
VARS2-206ENST00000473916 SLC35F3Q8IY50 421 aa16.93■□□□□ 0.3
VARS2-206ENST00000473916 ZNF655Q8N720 491 aaPredicted RBP16.93■□□□□ 0.3
VARS2-206ENST00000473916 AMBRA1Q9C0C7 1298 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms