RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 MRPL9Q9BYD2 267 aaKnown RBP3.83□□□□□ -1.8
CNOT4-209ENST00000473470 THAP2Q9H0W7 228 aa3.83□□□□□ -1.8
CNOT4-209ENST00000473470 RIMS4Q9H426 269 aaPredicted RBP3.83□□□□□ -1.8
CNOT4-209ENST00000473470 TMEM161AQ9NX61 479 aa3.83□□□□□ -1.8
CNOT4-209ENST00000473470 OR6C2Q9NZP2 312 aa3.83□□□□□ -1.8
CNOT4-209ENST00000473470 C19orf25Q9UFG5 118 aaPredicted RBP3.83□□□□□ -1.8
CNOT4-209ENST00000473470 GMEB2Q9UKD1 530 aa3.83□□□□□ -1.8
CNOT4-209ENST00000473470 RUVBL2Q9Y230 463 aaKnown RBP3.83□□□□□ -1.8
CNOT4-209ENST00000473470 HBS1LQ9Y450 684 aaKnown RBP3.83□□□□□ -1.8
CNOT4-209ENST00000473470 MROH7Q68CQ1 1323 aa3.83□□□□□ -1.8
CNOT4-209ENST00000473470 CACNA1FO60840 1977 aa3.83□□□□□ -1.8
CNOT4-209ENST00000473470 PTPRQQ9UMZ3 2332 aa3.83□□□□□ -1.8
CNOT4-209ENST00000473470 NOTCH2Q04721 2471 aa3.83□□□□□ -1.8
CNOT4-209ENST00000473470 MCM3APO60318 1980 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 TRAV18A0A075B6X5 111 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 ERI2A8K979 691 aaKnown RBP3.82□□□□□ -1.8
CNOT4-209ENST00000473470 KPNA7A9QM74 516 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 EPHB6O15197 1021 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 CTAGE5O15320 804 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 VTNP04004 478 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 ATP1B1P05026 303 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 LHCGRP22888 699 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 PIK3R1P27986 724 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 DUTP33316 252 aaKnown RBP3.82□□□□□ -1.8
CNOT4-209ENST00000473470 SFTPDP35247 375 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 KRTAP10-12P60413 245 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 MYL7Q01449 175 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 GPNMBQ14956 572 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 C2orf76Q3KRA6 126 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 LCN1P1Q5VSP4 162 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 TTC27Q6P3X3 843 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 ANKRD46Q86W74 232 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 LACC1Q8IV20 430 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 PRSS35Q8N3Z0 413 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 SPC24Q8NBT2 197 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 OR7A2PQ8NGA2 310 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 OR1L3Q8NH93 324 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 PHOSPHO2Q8TCD6 241 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 UBLCP1Q8WVY7 318 aaPredicted RBP3.82□□□□□ -1.8
CNOT4-209ENST00000473470 C10orf90Q96M02 699 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 TSSK2Q96PF2 358 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 BTBD9Q96Q07 612 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 SYT11Q9BT88 431 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 GPR173Q9NS66 373 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 DNHD1Q96M86 4753 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 NOTCH3Q9UM47 2321 aa3.82□□□□□ -1.8
CNOT4-209ENST00000473470 COL11A1P12107 1806 aaPredicted RBP3.81□□□□□ -1.8
CNOT4-209ENST00000473470 ASTN1O14525 1302 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 ELP1O95163 1332 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 C13orf42A0A1B0GVH6 325 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 FAM149AA5PLN7 773 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 MSGN1A6NI15 193 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 TTI1O43156 1089 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 RAD51DO75771 328 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 GLCEO94923 617 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 YES1P07947 543 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 IQCF3P0C7M6 154 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 UROSP10746 265 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 CETN2P41208 172 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 OR3A3P47888 321 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 DNA2P51530 1060 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 CCNA1P78396 465 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 C17orf67Q0P5P2 114 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 SRSF9Q13242 221 aaKnown RBP eCLIP3.81□□□□□ -1.8
CNOT4-209ENST00000473470 SLC39A12Q504Y0 691 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 TCEAL6Q6IPX3 200 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 TMEM207Q6UWW9 146 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 KCTD9Q7L273 389 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 PRUNE1Q86TP1 453 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 MARCH9Q86YJ5 346 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 KLHDC8AQ8IYD2 350 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 CARNMT1Q8N4J0 409 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 LRTM2Q8N967 370 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 SLC37A3Q8NCC5 494 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 METTL21AQ8WXB1 218 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 BCL2L2Q92843 193 aaPredicted RBP3.81□□□□□ -1.8
CNOT4-209ENST00000473470 TCEAL3Q969E4 200 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 PDLIM5Q96HC4 596 aaKnown RBP3.81□□□□□ -1.8
CNOT4-209ENST00000473470 RBM41Q96IZ5 413 aaKnown RBP3.81□□□□□ -1.8
CNOT4-209ENST00000473470 RASL10BQ96S79 203 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 ATOH8Q96SQ7 321 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 PYGO2Q9BRQ0 406 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 WWTR1Q9GZV5 400 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 FAM49AQ9H0Q0 323 aaPredicted RBP3.81□□□□□ -1.8
CNOT4-209ENST00000473470 POMKQ9H5K3 350 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 C10orf88Q9H8K7 445 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 RNPEPL1Q9HAU8 725 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 PNPLA3Q9NST1 481 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 IL36AQ9UHA7 158 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 CTNNA3Q9UI47 895 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 KIAA1217Q5T5P2 1943 aa3.81□□□□□ -1.8
CNOT4-209ENST00000473470 NBPF19A0A087WUL8 3843 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 NAV3Q8IVL0 2385 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 A0A1W2PRV1 198 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 FPGTO14772 594 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 TEX28O15482 410 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 SCO2O43819 266 aa3.8□□□□□ -1.8
CNOT4-209ENST00000473470 NME6O75414 186 aaPredicted RBP3.8□□□□□ -1.8
CNOT4-209ENST00000473470 SNAI1O95863 264 aaPredicted RBP3.8□□□□□ -1.8
CNOT4-209ENST00000473470 VCLP18206 1134 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms