RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 ERVK-6Q9BXR3 956 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 ZNF717Q9BY31 904 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-208ENST00000470076 EXO5Q9H790 373 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 DDX31Q9H8H2 851 aaKnown RBP16.12■□□□□ 0.17
COL7A1-208ENST00000470076 IPPKQ9H8X2 491 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 WDR41Q9HAD4 459 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 ERVK-19Q9WJR5 959 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 ASB4Q9Y574 426 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 FAM215AQ9Y5M1 114 aa16.12■□□□□ 0.17
COL7A1-208ENST00000470076 MED13LQ71F56 2210 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 A0A096LPK6 155 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 A0A0A6YYD5 115 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 TRGV5A0A0B4J1U4 118 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 HMX2A2RU54 273 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 OR6C76A6NM76 312 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 EEDO75530 441 aaKnown RBP16.11■□□□□ 0.17
COL7A1-208ENST00000470076 PRKRAO75569 313 aaKnown RBP16.11■□□□□ 0.17
COL7A1-208ENST00000470076 KLHL2O95198 593 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 FBXO45P0C2W1 286 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 FAM58BPP0C7Q3 252 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 GLI4P10075 376 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 NR2F6P10588 404 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 SERPINB3P29508 390 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 GALNSP34059 522 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 ZFP36L2P47974 494 aaKnown RBP16.11■□□□□ 0.17
COL7A1-208ENST00000470076 SLC37A1P57057 533 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 GTF2H2Q13888 395 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 ZNF267Q14586 743 aaPredicted RBP16.11■□□□□ 0.17
COL7A1-208ENST00000470076 TESK1Q15569 626 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 CPSF6Q16630 551 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL7A1-208ENST00000470076 RTL6Q6ICC9 239 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 GTF2H2CQ6P1K8 395 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 NUDT13Q86X67 352 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 CLYBLQ8N0X4 340 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 FBXW8Q8N3Y1 598 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 L3MBTL4Q8NA19 623 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 FAM13CQ8NE31 585 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 RIT1Q92963 219 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 GAL3ST4Q96RP7 486 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 WWTR1Q9GZV5 400 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 ZNF703Q9H7S9 590 aaPredicted RBP16.11■□□□□ 0.17
COL7A1-208ENST00000470076 ZFP64Q9NPA5 681 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 QPCTLQ9NXS2 382 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 TNFRSF10DQ9UBN6 386 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 KCNN3Q9UGI6 736 aa16.11■□□□□ 0.17
COL7A1-208ENST00000470076 SETD2Q9BYW2 2564 aaPredicted RBP16.11■□□□□ 0.17
COL7A1-208ENST00000470076 A0A1W2PR48 441 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 LRRC14BA6NHZ5 514 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 FAM47E-STBD1D6RA91 191 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 FOXE1O00358 373 aaPredicted RBP16.1■□□□□ 0.17
COL7A1-208ENST00000470076 TMPRSS11DO60235 418 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 SLC35E2P0CK97 266 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 GABRA1P14867 456 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 TYK2P29597 1187 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 SERPINB8P50452 374 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 RIPPLY3P57055 190 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 ETF1P62495 437 aaKnown RBP16.1■□□□□ 0.17
COL7A1-208ENST00000470076 EBPQ15125 230 aaKnown RBP16.1■□□□□ 0.17
COL7A1-208ENST00000470076 C1orf185Q5T7R7 199 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 PRAMEF20Q5VT98 475 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 SPNS3Q6ZMD2 512 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 ZNF572Q7Z3I7 529 aaPredicted RBP16.1■□□□□ 0.17
COL7A1-208ENST00000470076 GOLGA7Q7Z5G4 137 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 LRRC25Q8N386 305 aaPredicted RBP16.1■□□□□ 0.17
COL7A1-208ENST00000470076 WDR20Q8TBZ3 569 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 MRRFQ96E11 262 aaKnown RBP16.1■□□□□ 0.17
COL7A1-208ENST00000470076 GPR78Q96P69 363 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 ZNF559Q9BR84 538 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 ACKR4Q9NPB9 350 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 CPSF2Q9P2I0 782 aaKnown RBP16.1■□□□□ 0.17
COL7A1-208ENST00000470076 RNF11Q9Y3C5 154 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 PCDHGB3Q9Y5G1 929 aa16.1■□□□□ 0.17
COL7A1-208ENST00000470076 CHCHD2Q9Y6H1 151 aaPredicted RBP16.1■□□□□ 0.17
COL7A1-208ENST00000470076 NCKAP5O14513 1909 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 ARHGAP21Q5T5U3 1957 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 MTORP42345 2549 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 ANKHD1Q8IWZ3 2542 aaKnown RBP16.09■□□□□ 0.17
COL7A1-208ENST00000470076 FREM3P0C091 2139 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 A0A0G2JNJ9 132 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 GLOD5A6NK44 160 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 SEMA3DO95025 777 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 CLDN9O95484 217 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 AIFM1O95831 613 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 ALDOAP04075 364 aaKnown RBP16.09■□□□□ 0.17
COL7A1-208ENST00000470076 RFPL3SP0C7P2 107 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 PHBP35232 272 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 UAP1Q16222 522 aaPredicted RBP16.09■□□□□ 0.17
COL7A1-208ENST00000470076 NTRK2Q16620 822 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 TBCELQ5QJ74 424 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 CES4AQ5XG92 561 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 OR52E8Q6IFG1 317 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 TAGAPQ8N103 731 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 MYRIPQ8NFW9 859 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 OR10G3Q8NGC4 313 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 DOK4Q8TEW6 326 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 SERPINI1Q99574 410 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 PROK2Q9HC23 129 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 SPRR3Q9UBC9 169 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 B4GALT7Q9UBV7 327 aa16.09■□□□□ 0.17
COL7A1-208ENST00000470076 Q9UFV3 132 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms