RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ZNF385DQ9H6B1 395 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 PRDM7Q9NQW5 492 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 NDE1Q9NXR1 346 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 PLA2G3Q9NZ20 509 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 PRPF19Q9UMS4 504 aaKnown RBP13.54□□□□□ -0.24
COL27A1-203ENST00000468565 DAPP1Q9UN19 280 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 MRPS33Q9Y291 106 aaKnown RBP13.54□□□□□ -0.24
COL27A1-203ENST00000468565 NTNG1Q9Y2I2 539 aa13.54□□□□□ -0.24
COL27A1-203ENST00000468565 FLNBO75369 2602 aaKnown RBP13.54□□□□□ -0.24
COL27A1-203ENST00000468565 OR5H15A6NDH6 313 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 WDPCPO95876 746 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 IMPDH1P20839 514 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 MAOAP21397 527 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 CERS1P27544 350 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 ZNF33BQ06732 778 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 SRSF1Q07955 248 aaKnown RBP eCLIP13.53□□□□□ -0.24
COL27A1-203ENST00000468565 GTF2H2Q13888 395 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 INAQ16352 499 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 GTF2H2CQ6P1K8 395 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 CHSY3Q70JA7 882 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 ZNF595Q8IYB9 648 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 FBXW8Q8N3Y1 598 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 OR1N1Q8NGS0 311 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 CEP70Q8NHQ1 597 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 ELP5Q8TE02 316 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 CMTM7Q96FZ5 175 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 MAELQ96JY0 434 aaKnown RBP13.53□□□□□ -0.24
COL27A1-203ENST00000468565 SERPINI1Q99574 410 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 NECTIN3Q9NQS3 549 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 STMN3Q9NZ72 180 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 LRRK2Q5S007 2527 aa13.53□□□□□ -0.24
COL27A1-203ENST00000468565 SAGE2PA6NJ88 616 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 STX16-NPEPL1H3BU86 382 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 E2F3O00716 465 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 CLDN4O14493 209 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 CDK2AP1O14519 115 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 SDHDO14521 159 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 STX16O14662 325 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 SCELO95171 688 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 PCNAP12004 261 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 PIK3CBP42338 1070 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 LIM2P55344 173 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 TAS2R50P59544 299 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 MEP1AQ16819 746 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 ACER2Q5QJU3 275 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 GOLGA7Q7Z5G4 137 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 UBE3DQ7Z6J8 389 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 PTGR2Q8N8N7 351 aaPredicted RBP13.52□□□□□ -0.24
COL27A1-203ENST00000468565 NRG4Q8WWG1 115 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 L3HYPDHQ96EM0 354 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 FAM210AQ96ND0 272 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 ACTR8Q9H981 624 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 LYRM4Q9HD34 91 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 PRTFDC1Q9NRG1 225 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 PCDHGA11Q9Y5H2 935 aa13.52□□□□□ -0.24
COL27A1-203ENST00000468565 H0YIV9 168 aa13.52□□□□□ -0.25
COL27A1-203ENST00000468565 AIM2O14862 343 aa13.52□□□□□ -0.25
COL27A1-203ENST00000468565 PDE5AO76074 875 aa13.52□□□□□ -0.25
COL27A1-203ENST00000468565 NUDT2P50583 147 aa13.52□□□□□ -0.25
COL27A1-203ENST00000468565 ARFIP1P53367 373 aa13.52□□□□□ -0.25
COL27A1-203ENST00000468565 NR6A1Q15406 480 aa13.52□□□□□ -0.25
COL27A1-203ENST00000468565 FHL5Q5TD97 284 aa13.52□□□□□ -0.25
COL27A1-203ENST00000468565 KHDRBS2Q5VWX1 349 aaKnown RBP13.52□□□□□ -0.25
COL27A1-203ENST00000468565 SLC5A8Q8N695 610 aa13.52□□□□□ -0.25
COL27A1-203ENST00000468565 REPS1Q96D71 796 aa13.52□□□□□ -0.25
COL27A1-203ENST00000468565 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.52□□□□□ -0.25
COL27A1-203ENST00000468565 IPPKQ9H8X2 491 aa13.52□□□□□ -0.25
COL27A1-203ENST00000468565 ZBTB26Q9HCK0 441 aa13.52□□□□□ -0.25
COL27A1-203ENST00000468565 S100A14Q9HCY8 104 aa13.52□□□□□ -0.25
COL27A1-203ENST00000468565 ABI3Q9P2A4 366 aa13.52□□□□□ -0.25
COL27A1-203ENST00000468565 CLDN16Q9Y5I7 305 aa13.52□□□□□ -0.25
COL27A1-203ENST00000468565 BLACEA4D250 179 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 LRRC14BA6NHZ5 514 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 TMEM233B4DJY2 109 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 CYR61O00622 381 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 SIX3O95343 332 aaPredicted RBP13.51□□□□□ -0.25
COL27A1-203ENST00000468565 BAG2O95816 211 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 TGFB1P01137 390 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 ATP5A1P25705 553 aaKnown RBP13.51□□□□□ -0.25
COL27A1-203ENST00000468565 PHEXP78562 749 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 POLEQ07864 2286 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 MRPL49Q13405 166 aaKnown RBP13.51□□□□□ -0.25
COL27A1-203ENST00000468565 AP5B1Q2VPB7 878 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 DEPDC1Q5TB30 811 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 ZNF793Q6ZN11 406 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 BEST3Q8N1M1 668 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 ACOT4Q8N9L9 421 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 L3MBTL4Q8NA19 623 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 FAM47BQ8NA70 645 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 NFAM1Q8NET5 270 aaPredicted RBP13.51□□□□□ -0.25
COL27A1-203ENST00000468565 HUS1BQ8NHY5 278 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 SUN3Q8TAQ9 357 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 GRHL3Q8TE85 626 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 FAR1Q8WVX9 515 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 PHF21BQ96EK2 531 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 MAGEB10Q96LZ2 347 aaPredicted RBP13.51□□□□□ -0.25
COL27A1-203ENST00000468565 NPAS2Q99743 824 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 MEAF6Q9HAF1 191 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 PRM3Q9NNZ6 103 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 USP9XQ93008 2570 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms