RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 ART5Q96L15 291 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 IMMP1LQ96LU5 166 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 MAGEB18Q96M61 343 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 UBL7Q96S82 380 aaPredicted RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 LPAR4Q99677 370 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 SMAD5Q99717 465 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 MACROD1Q9BQ69 325 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 GSX2Q9BZM3 304 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 RNF32Q9H0A6 362 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ING2Q9H160 280 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 TUBB1Q9H4B7 451 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 RPF2Q9H7B2 306 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 MEAF6Q9HAF1 191 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 LRTM1Q9HBL6 345 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 SRA1Q9HD15 236 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 TNFRSF12AQ9NP84 129 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 MMP25Q9NPA2 562 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ADAP2Q9NPF8 381 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 FARSBQ9NSD9 589 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 INTS9Q9NV88 658 aaKnown RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 HCN3Q9P1Z3 774 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 C5AR2Q9P296 337 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 TEKT2Q9UIF3 430 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 FBXL4Q9UKA2 621 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 MAN2B2Q9Y2E5 1009 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 ATG4BQ9Y4P1 393 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 TIMM22Q9Y584 194 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 PCDHA9Q9Y5H5 950 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 CROCCQ5TZA2 2017 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 RP1L1Q8IWN7 2480 aaPredicted RBP3.3□□□□□ -1.88
TRIM59-202ENST00000468542 HIVEP3Q5T1R4 2406 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 POLEQ07864 2286 aa3.3□□□□□ -1.88
TRIM59-202ENST00000468542 NBASA2RRP1 2371 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 A0A087WV62 115 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 GNG14A0A1W2PPG7 69 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 A0A1W2PR48 441 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ZNF860A6NHJ4 632 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SAGE2PA6NJ88 616 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 TTC36A6NLP5 189 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 OR6C76A6NM76 312 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 TMEM233B4DJY2 109 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 TGFBR3LH3BV60 316 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 AGRPO00253 132 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 RTCAO00442 366 aaKnown RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 PIP5K1BO14986 540 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ITM2AO43736 263 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 PLOD3O60568 738 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 B4GALT2O60909 372 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SEC22BO75396 215 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 JRKO75564 520 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 BCAS2O75934 225 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SOX30O94993 753 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 AIFM1O95831 613 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 STATHP02808 62 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 IGKV3-11P04433 115 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 KLK1P06870 262 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ANXA4P09525 319 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 CPMP14384 443 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 IDO1P14902 403 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 CHN1P15882 459 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 LBPP18428 481 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SDC1P18827 310 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 CSNK2A2P19784 350 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 MAOAP21397 527 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 BGNP21810 368 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 MPIP34949 423 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 FRKP42685 505 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 HTR6P50406 440 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 GPR143P51810 404 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 EFNA3P52797 238 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 HNRNPH2P55795 449 aaKnown RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 POLE2P56282 527 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SLC26A5P58743 744 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 RPS18P62269 152 aaKnown RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ERVK-8P63133 956 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 RAE1P78406 368 aaKnown RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 HMGCS1Q01581 520 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 FOLH1Q04609 750 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 LRRC74AQ0VAA2 488 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 FUT7Q11130 342 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 STX4Q12846 297 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 CHAF1BQ13112 559 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SLC13A2Q13183 592 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SRSF6Q13247 344 aaKnown RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 ATP1A4Q13733 1029 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 PDE7AQ13946 482 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 MLC1Q15049 377 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 INAQ16352 499 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 TBR1Q16650 682 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SYT16Q17RD7 645 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 COL28A1Q2UY09 1125 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 RFTN2Q52LD8 501 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SFT2D3Q587I9 215 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SGO1Q5FBB7 561 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 CRB2Q5IJ48 1285 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 SPDYAQ5MJ70 313 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 TCHHL1Q5QJ38 904 aaPredicted RBP3.29□□□□□ -1.88
TRIM59-202ENST00000468542 C6orf136Q5SQH8 315 aa3.29□□□□□ -1.88
TRIM59-202ENST00000468542 AGAP7PQ5VUJ5 663 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms