RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 MAZP56270 477 aaKnown RBP12.08□□□□□ -0.47
VAPB-203ENST00000463370 ARF3P61204 181 aaPredicted RBP12.08□□□□□ -0.47
VAPB-203ENST00000463370 SPIBQ01892 262 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 FUT5Q11128 374 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 EPS8Q12929 822 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 ELOAQ14241 798 aaKnown RBP12.08□□□□□ -0.47
VAPB-203ENST00000463370 LASP1Q14847 261 aaKnown RBP12.08□□□□□ -0.47
VAPB-203ENST00000463370 ZC3H12BQ5HYM0 836 aaKnown RBP12.08□□□□□ -0.47
VAPB-203ENST00000463370 LAIR1Q6GTX8 287 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 GPR153Q6NV75 609 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 RBM45Q8IUH3 476 aaKnown RBP12.08□□□□□ -0.47
VAPB-203ENST00000463370 CCDC71Q8IV32 467 aaPredicted RBP12.08□□□□□ -0.47
VAPB-203ENST00000463370 OR4C15Q8NGM1 316 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 BAHD1Q8TBE0 780 aaPredicted RBP12.08□□□□□ -0.47
VAPB-203ENST00000463370 ZDHHC1Q8WTX9 485 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 LZICQ8WZA0 190 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 DGCR14Q96DF8 476 aaKnown RBP12.08□□□□□ -0.47
VAPB-203ENST00000463370 ZFYVE21Q9BQ24 234 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 TREX2Q9BQ50 279 aaPredicted RBP12.08□□□□□ -0.47
VAPB-203ENST00000463370 ADNPQ9H2P0 1102 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 TRPC4Q9UBN4 977 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 PCDHGB3Q9Y5G1 929 aa12.08□□□□□ -0.47
VAPB-203ENST00000463370 MDC1Q14676 2089 aaKnown RBP12.08□□□□□ -0.48
VAPB-203ENST00000463370 KIR2DS5A0A0G2JLQ3 304 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 A0A0G2JNG1 304 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 CCDC160A6NGH7 325 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 KIR2DS3K7RE56 304 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 SLC28A2O43868 658 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 ZNF217O75362 1048 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 JRKO75564 520 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 NR2F6P10588 404 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 ITGAMP11215 1152 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 DDX5P17844 614 aaKnown RBP12.08□□□□□ -0.48
VAPB-203ENST00000463370 MATN1P21941 496 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 CRHBPP24387 322 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 XCR1P46094 333 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 TPD52P55327 224 aaPredicted RBP12.08□□□□□ -0.48
VAPB-203ENST00000463370 LIM2P55344 173 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 SIM1P81133 766 aaPredicted RBP12.08□□□□□ -0.48
VAPB-203ENST00000463370 PIGFQ07326 219 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 KIR2DS5Q14953 304 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 EXOC3L2Q2M3D2 409 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 Q6ZPB1 254 aaPredicted RBP12.08□□□□□ -0.48
VAPB-203ENST00000463370 WDR53Q7Z5U6 358 aaPredicted RBP12.08□□□□□ -0.48
VAPB-203ENST00000463370 ARMC8Q8IUR7 673 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 OR4D11Q8NGI4 311 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 CNIH3Q8TBE1 160 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 GEMIN6Q8WXD5 167 aaKnown RBP12.08□□□□□ -0.48
VAPB-203ENST00000463370 KAT2AQ92830 837 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 UBE2FQ969M7 185 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 NRBF2Q96F24 287 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 FEVQ99581 238 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 NPLQ9BXD5 320 aaPredicted RBP12.08□□□□□ -0.48
VAPB-203ENST00000463370 FAM60AQ9NP50 221 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 THSD1Q9NS62 852 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 KRT84Q9NSB2 600 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 KIF17Q9P2E2 1029 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 ENTPD4Q9Y227 616 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 ORC6Q9Y5N6 252 aa12.08□□□□□ -0.48
VAPB-203ENST00000463370 ENO4A6NNW6 628 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 FFAR1O14842 300 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 PCDH17O14917 1159 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 GUCY1B2O75343 617 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 FESP07332 822 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 HLCSP50747 726 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 DEFB110Q30KQ9 67 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 C6orf141Q5SZD1 244 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 ZNF605Q86T29 641 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 LACC1Q8IV20 430 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 SIX5Q8N196 739 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 SLC5A8Q8N695 610 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 OR9Q2Q8NGE9 314 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 OR5T3Q8NGG3 340 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 DOK4Q8TEW6 326 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 ZFPM2Q8WW38 1151 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 CDX2Q99626 313 aaPredicted RBP12.07□□□□□ -0.48
VAPB-203ENST00000463370 EQTNQ9NQ60 294 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 VPS13AQ96RL7 3174 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 A0A0J9YY10 115 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 A0A1W2PR77 199 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 OR5K3A6NET4 321 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 FAM227AF5H4B4 570 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 IFNA14P01570 189 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 HTR1AP08908 422 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 ST6GAL1P15907 406 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 CDH2P19022 906 aaPredicted RBP12.07□□□□□ -0.48
VAPB-203ENST00000463370 CSNK2A2P19784 350 aaPredicted RBP12.07□□□□□ -0.48
VAPB-203ENST00000463370 ID2Q02363 134 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 TGM3Q08188 693 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 PMS2P3Q13401 168 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 CEBPEQ15744 281 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 RFX4Q33E94 735 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 TTC29Q8NA56 475 aaPredicted RBP12.07□□□□□ -0.48
VAPB-203ENST00000463370 ADAMTS16Q8TE57 1224 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 COL21A1Q96P44 957 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 NIPSNAP1Q9BPW8 284 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 ACER3Q9NUN7 267 aa12.07□□□□□ -0.48
VAPB-203ENST00000463370 PAK1IP1Q9NWT1 392 aaPredicted RBP12.07□□□□□ -0.48
VAPB-203ENST00000463370 LYARQ9NX58 379 aaKnown RBP12.07□□□□□ -0.48
VAPB-203ENST00000463370 TUBA8Q9NY65 449 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms