RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ABCG4Q9H172 646 aa13.35□□□□□ -0.27
ERCC3-205ENST00000460485 XKR8Q9H6D3 395 aa13.35□□□□□ -0.27
ERCC3-205ENST00000460485 C3orf14Q9HBI5 128 aa13.35□□□□□ -0.27
ERCC3-205ENST00000460485 BCL2L10Q9HD36 194 aa13.35□□□□□ -0.27
ERCC3-205ENST00000460485 PRDM7Q9NQW5 492 aa13.35□□□□□ -0.27
ERCC3-205ENST00000460485 SIRT3Q9NTG7 399 aaPredicted RBP13.35□□□□□ -0.27
ERCC3-205ENST00000460485 SCN3BQ9NY72 215 aa13.35□□□□□ -0.27
ERCC3-205ENST00000460485 SCHIP1Q9P0W5 487 aaPredicted RBP13.35□□□□□ -0.27
ERCC3-205ENST00000460485 UTS2RQ9UKP6 389 aa13.35□□□□□ -0.27
ERCC3-205ENST00000460485 NAALAD2Q9Y3Q0 740 aa13.35□□□□□ -0.27
ERCC3-205ENST00000460485 ASB4Q9Y574 426 aa13.35□□□□□ -0.27
ERCC3-205ENST00000460485 SNX8Q9Y5X2 465 aa13.35□□□□□ -0.27
ERCC3-205ENST00000460485 SNX5Q9Y5X3 404 aa13.35□□□□□ -0.27
ERCC3-205ENST00000460485 LYVE1Q9Y5Y7 322 aa13.35□□□□□ -0.27
ERCC3-205ENST00000460485 CEPT1Q9Y6K0 416 aa13.35□□□□□ -0.27
ERCC3-205ENST00000460485 ENPP4Q9Y6X5 453 aa13.35□□□□□ -0.27
ERCC3-205ENST00000460485 FRYQ5TBA9 3013 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 SHISA7A6NL88 538 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 ENO4A6NNW6 628 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 C2orf74A8MZ97 194 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 hCG_2039718K7EN88 272 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 TNFRSF11BO00300 401 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 RTCAO00442 366 aaKnown RBP13.34□□□□□ -0.27
ERCC3-205ENST00000460485 ZSCAN9O15535 394 aaPredicted RBP13.34□□□□□ -0.27
ERCC3-205ENST00000460485 GDF9O60383 454 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 OXSR1O95747 527 aaPredicted RBP13.34□□□□□ -0.27
ERCC3-205ENST00000460485 VIPP01282 170 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 ETS2P15036 469 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 JUNDP17535 347 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 RRM2P31350 389 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 MPIP34949 423 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 GPC1P35052 558 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 XCR1P46094 333 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 HMGA2P52926 109 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 CRYBA2P53672 197 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 MAPK10P53779 464 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 PLA2G16P53816 162 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 IST1P53990 364 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 CRISP3P54108 245 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 ISL1P61371 349 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 MVKQ03426 396 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 SIM2Q14190 667 aaPredicted RBP13.34□□□□□ -0.27
ERCC3-205ENST00000460485 PLCL1Q15111 1095 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 ALG11Q2TAA5 492 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 ZIK1Q3SY52 487 aaPredicted RBP13.34□□□□□ -0.27
ERCC3-205ENST00000460485 ABHD13Q7L211 337 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 TMEM179BQ7Z7N9 219 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 NRROSQ86YC3 692 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 DEPDC4Q8N2C3 294 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 PARP8Q8N3A8 854 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 TTC29Q8NA56 475 aaPredicted RBP13.34□□□□□ -0.27
ERCC3-205ENST00000460485 MAL2Q969L2 176 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 EXOSC8Q96B26 276 aaKnown RBP13.34□□□□□ -0.27
ERCC3-205ENST00000460485 AMDHD1Q96NU7 426 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 SERINC2Q96SA4 455 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 ZNF556Q9HAH1 456 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 TIMMDC1Q9NPL8 285 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 TEX10Q9NXF1 929 aaPredicted RBP13.34□□□□□ -0.27
ERCC3-205ENST00000460485 NDUFAF4Q9P032 175 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 ZNF624Q9P2J8 865 aaPredicted RBP13.34□□□□□ -0.27
ERCC3-205ENST00000460485 NDRG4Q9ULP0 352 aaKnown RBP13.34□□□□□ -0.27
ERCC3-205ENST00000460485 LIPT1Q9Y234 373 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 PLEKHM1Q9Y4G2 1056 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 PCDHGB1Q9Y5G3 927 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 GMPPBQ9Y5P6 360 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 SPACA6W5XKT8 324 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 ARHGEF17Q96PE2 2063 aaPredicted RBP13.34□□□□□ -0.27
ERCC3-205ENST00000460485 CEP295Q9C0D2 2601 aa13.34□□□□□ -0.27
ERCC3-205ENST00000460485 ZFYVE26Q68DK2 2539 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 E9PQ18 207 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 CASC3O15234 703 aaKnown RBP13.33□□□□□ -0.28
ERCC3-205ENST00000460485 GCM2O75603 506 aaPredicted RBP13.33□□□□□ -0.28
ERCC3-205ENST00000460485 SOX30O94993 753 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 TFPTP0C1Z6 253 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 NR2F6P10588 404 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 EEF1B2P24534 225 aaKnown RBP13.33□□□□□ -0.28
ERCC3-205ENST00000460485 DCKP27707 260 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 TLX1P31314 330 aaPredicted RBP13.33□□□□□ -0.28
ERCC3-205ENST00000460485 SLC19A1P41440 591 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 DAPP51397 102 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 CLDN2P57739 230 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 SKP1P63208 163 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 HSPB3Q12988 150 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 SLAMF1Q13291 335 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 LSAMPQ13449 338 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 TP53BP2Q13625 1128 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 LPAL2Q16609 132 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 PROX2Q3B8N5 592 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 ZNF793Q6ZN11 406 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 Q6ZSR6 202 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 ZNF605Q86T29 641 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 ERI1Q8IV48 349 aaKnown RBP13.33□□□□□ -0.28
ERCC3-205ENST00000460485 SVOPQ8N4V2 548 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 OR5AK3PQ8NH89 298 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 SUN3Q8TAQ9 357 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 HMGB4Q8WW32 186 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 IPCEF1Q8WWN9 437 aaPredicted RBP13.33□□□□□ -0.28
ERCC3-205ENST00000460485 TM4SF19Q96DZ7 209 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 HRASLS5Q96KN8 279 aa13.33□□□□□ -0.28
ERCC3-205ENST00000460485 DOK1Q99704 481 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms