RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 NOL11Q9H8H0 719 aaKnown RBP14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 IL1RL2Q9HB29 575 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 TSC22D4Q9Y3Q8 395 aa14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 ZNF469Q96JG9 3925 aaPredicted RBP14.55□□□□□ -0.08
CHCHD3-204ENST00000457942 POC1B-GALNT4F8VUJ3 575 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 KIF2AO00139 706 aaPredicted RBP14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 HRKO00198 91 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 PROM1O43490 865 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 KLK8O60259 260 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 ZNF354AO60765 605 aaPredicted RBP14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 AIFM1O95831 613 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 GBAP04062 536 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 RBP1P09455 135 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 FAM58BPP0C7Q3 252 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 DRD2P14416 443 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 NR0B1P51843 470 aaKnown RBP14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 ARFIP1P53367 373 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 KCNJ2P63252 427 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 CUL3Q13618 768 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 MPEG1Q2M385 716 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 PIGGQ5H8A4 983 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 UBAP2Q5T6F2 1119 aaKnown RBP14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 C6orf163Q5TEZ5 329 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 PRAMEF20Q5VT98 475 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 ZNF585AQ6P3V2 769 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 DGAT2L6Q6ZPD8 337 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 PLD6Q8N2A8 252 aaKnown RBP14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 TMEM251Q8N6I4 163 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 OR5M9Q8NGP3 310 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 KIF18AQ8NI77 898 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 RIT1Q92963 219 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 SPACA9Q96E40 222 aaPredicted RBP14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 PAFAH2Q99487 392 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 FMO2Q99518 471 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 SERPINI1Q99574 410 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 TMUB1Q9BVT8 246 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 GSX1Q9H4S2 264 aaPredicted RBP14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 ZDHHC11Q9H8X9 412 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 PLSCR2Q9NRY7 297 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 ZNF358Q9NW07 568 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 TUBA8Q9NY65 449 aaPredicted RBP14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 XPR1Q9UBH6 696 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 TMCO1Q9UM00 188 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 LIPGQ9Y5X9 500 aa14.54□□□□□ -0.08
CHCHD3-204ENST00000457942 PHF3Q92576 2039 aaKnown RBP14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 A0A0A6YYD5 115 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 FIGNL2A6NMB9 653 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 TMPRSS11DO60235 418 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 GPR75O95800 540 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 IGKV3-11P04433 115 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 BSGP35613 385 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 PIGAP37287 484 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 MAN2A2P49641 1150 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 SERPINB9P50453 376 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 IFT88Q13099 833 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 TSNAXIP1Q2TAA8 658 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 SLC22A10Q63ZE4 541 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 OR52E8Q6IFG1 317 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 METTL2BQ6P1Q9 378 aaKnown RBP14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 RPRMLQ8N4K4 120 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 MARVELD2Q8N4S9 558 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 L3MBTL4Q8NA19 623 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 OR52B6Q8NGF0 335 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 OR10Q1Q8NGQ4 319 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 UHMK1Q8TAS1 419 aaKnown RBP14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 WDR20Q8TBZ3 569 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 SLC44A1Q8WWI5 657 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 JSRP1Q96MG2 331 aaPredicted RBP14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 GPR78Q96P69 363 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 TSPYL1Q9H0U9 437 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 NPDC1Q9NQX5 325 aaPredicted RBP14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 PNPLA3Q9NST1 481 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 ACAD8Q9UKU7 415 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 BOKQ9UMX3 212 aaPredicted RBP14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 RNF6Q9Y252 685 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 ABCA2Q9BZC7 2435 aa14.53□□□□□ -0.08
CHCHD3-204ENST00000457942 A0A1W2PR48 441 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 WASHC1A8K0Z3 465 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 OR7A17O14581 309 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 BCKDKO14874 412 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 GLSO94925 669 aaPredicted RBP14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 CTAGE8P0CG41 777 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 PIK3R1P27986 724 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 CHRNB4P30926 498 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 DNAJA1P31689 397 aaKnown RBP14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 IST1P53990 364 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 PMPCAQ10713 525 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 SPRED3Q2MJR0 410 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 GXYLT1Q4G148 440 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 SGO1Q5FBB7 561 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 HLA-DQA1Q5Y7H0 255 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 FRG2Q64ET8 278 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 MRM1Q6IN84 353 aaKnown RBP14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 ACAD11Q709F0 780 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 CCDC71Q8IV32 467 aaPredicted RBP14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 CTAGE4Q8IX94 777 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 DND1Q8IYX4 353 aaKnown RBP14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 TAGAPQ8N103 731 aa14.52□□□□□ -0.09
CHCHD3-204ENST00000457942 MNS1Q8NEH6 495 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms