RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 CCL27Q9Y4X3 112 aa16.58■□□□□ 0.24
COPS7A-202ENST00000455113 ARHGAP10A1A4S6 786 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 FCHO1O14526 889 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 RGS14O43566 566 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 DYRK3O43781 588 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 COX7A2P14406 83 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 HNRNPFP52597 415 aaKnown RBP16.57■□□□□ 0.24
COPS7A-202ENST00000455113 CSTF3Q12996 717 aaKnown RBP16.57■□□□□ 0.24
COPS7A-202ENST00000455113 BIKQ13323 160 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 ELAVL1Q15717 326 aaKnown RBP16.57■□□□□ 0.24
COPS7A-202ENST00000455113 IMPG1Q17R60 797 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 RPUSD3Q6P087 351 aaKnown RBP16.57■□□□□ 0.24
COPS7A-202ENST00000455113 ACAD11Q709F0 780 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 PAGE2Q7Z2X7 111 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 RPS19BP1Q86WX3 136 aaKnown RBP16.57■□□□□ 0.24
COPS7A-202ENST00000455113 LGI4Q8N135 537 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 BEST3Q8N1M1 668 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 TMEM52Q8NDY8 209 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 TUBGCP3Q96CW5 907 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 SORBS1Q9BX66 1292 aaKnown RBP16.57■□□□□ 0.24
COPS7A-202ENST00000455113 CDCP1Q9H5V8 836 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 RPF2Q9H7B2 306 aaKnown RBP16.57■□□□□ 0.24
COPS7A-202ENST00000455113 BRF2Q9HAW0 419 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 TCF7L2Q9NQB0 619 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 GIMAP2Q9UG22 337 aa16.57■□□□□ 0.24
COPS7A-202ENST00000455113 CDK2AP1O14519 115 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 LDB3O75112 727 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 SEMA3DO95025 777 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 HSD3B1P14060 373 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 HSD3B2P26439 372 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 OC90Q02509 493 aaPredicted RBP16.56■□□□□ 0.24
COPS7A-202ENST00000455113 INAQ16352 499 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 LSM12Q3MHD2 195 aaKnown RBP16.56■□□□□ 0.24
COPS7A-202ENST00000455113 NXNQ6DKJ4 435 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 ACTRT2Q8TDY3 377 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 STON2Q8WXE9 905 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 VMP1Q96GC9 406 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 RILPQ96NA2 401 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 AKTIPQ9H8T0 292 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 SLC12A4Q9UP95 1085 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 ARL2BPQ9Y2Y0 163 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 PEX11AO75192 247 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 ETHE1O95571 254 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 NR6A1Q15406 480 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 LARP4Q71RC2 724 aaKnown RBP eCLIP16.56■□□□□ 0.241e-6■■■□□ 16.7
COPS7A-202ENST00000455113 AMER2Q8N7J2 671 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 CEP70Q8NHQ1 597 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 TANKQ92844 425 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 RBM18Q96H35 190 aaKnown RBP16.56■□□□□ 0.24
COPS7A-202ENST00000455113 CCDC28BQ9BUN5 200 aa16.56■□□□□ 0.24
COPS7A-202ENST00000455113 DDX31Q9H8H2 851 aaKnown RBP16.56■□□□□ 0.24
COPS7A-202ENST00000455113 NBASA2RRP1 2371 aa16.55■□□□□ 0.24
COPS7A-202ENST00000455113 GABRR3A8MPY1 467 aa16.55■□□□□ 0.24
COPS7A-202ENST00000455113 LSM1O15116 133 aaKnown RBP16.55■□□□□ 0.24
COPS7A-202ENST00000455113 GNLYP22749 145 aa16.55■□□□□ 0.24
COPS7A-202ENST00000455113 TNFRSF17Q02223 184 aa16.55■□□□□ 0.24
COPS7A-202ENST00000455113 GALNTL6Q49A17 601 aa16.55■□□□□ 0.24
COPS7A-202ENST00000455113 ATP6AP1LQ52LC2 224 aa16.55■□□□□ 0.24
COPS7A-202ENST00000455113 SPDYAQ5MJ70 313 aa16.55■□□□□ 0.24
COPS7A-202ENST00000455113 KIF2BQ8N4N8 673 aa16.55■□□□□ 0.24
COPS7A-202ENST00000455113 BCORP1Q8N888 145 aa16.55■□□□□ 0.24
COPS7A-202ENST00000455113 CCDC197Q8NCU1 140 aa16.55■□□□□ 0.24
COPS7A-202ENST00000455113 NFAM1Q8NET5 270 aaPredicted RBP16.55■□□□□ 0.24
COPS7A-202ENST00000455113 OR14A16Q8NHC5 309 aa16.55■□□□□ 0.24
COPS7A-202ENST00000455113 VPS29Q9UBQ0 182 aa16.55■□□□□ 0.24
COPS7A-202ENST00000455113 TRBV11-1A0A0K0K1C0 115 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 E9PBE3 544 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 PRAMEF2O60811 474 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 RSL1D1O76021 490 aaKnown RBP16.54■□□□□ 0.24
COPS7A-202ENST00000455113 RASAL1O95294 804 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 ZIC2O95409 532 aaPredicted RBP16.54■□□□□ 0.24
COPS7A-202ENST00000455113 FAM58BPP0C7Q3 252 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 CD46P15529 392 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 BSGP35613 385 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 C6orf136Q5SQH8 315 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 APCDD1LQ8NCL9 501 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 MORN4Q8NDC4 146 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 GRHL3Q8TE85 626 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 NCLNQ969V3 563 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 PPP3R2Q96LZ3 170 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 DGAT2Q96PD7 388 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 ANKRD10Q9NXR5 420 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 HEY2Q9UBP5 337 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 COPS7AQ9UBW8 275 aa16.54■□□□□ 0.24
COPS7A-202ENST00000455113 C17orf105B2RV13 164 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 NPIPB8E9PQR5 432 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 PROM1O43490 865 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 GUCY1B2O75343 617 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 NR2F6P10588 404 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 LBPP18428 481 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 PRPH2P23942 346 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 CYB561P49447 251 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 PLIN5Q00G26 463 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 TUBA3CQ13748 450 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 OR1C1Q15619 314 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 ZNF766Q5HY98 468 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 FHL5Q5TD97 284 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 TUBA3EQ6PEY2 450 aa16.53■□□□□ 0.24
COPS7A-202ENST00000455113 FAM98AQ8NCA5 519 aaKnown RBP16.53■□□□□ 0.24
COPS7A-202ENST00000455113 FAR1Q8WVX9 515 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms