RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 GPR180Q86V85 440 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 CDC20BQ86Y33 519 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 LAS2Q8IYD9 372 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 ST13P4Q8IZP2 240 aaPredicted RBP7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 ZNF321PQ8N8H1 164 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 ZNF473Q8WTR7 871 aaKnown RBP7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 ANKRD49Q8WVL7 239 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 NRGNQ92686 78 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 RGMAQ96B86 450 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 ANKRD9Q96BM1 317 aaPredicted RBP7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 REPS1Q96D71 796 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 DTNBP1Q96EV8 351 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 CAPZA3Q96KX2 299 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 JSRP1Q96MG2 331 aaPredicted RBP7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 SECISBP2Q96T21 854 aaKnown RBP7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 MAPKAP1Q9BPZ7 522 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 TMEM79Q9BSE2 394 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 DOHHQ9BU89 302 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 MS4A8Q9BY19 250 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 DDX47Q9H0S4 455 aaKnown RBP7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 WDR41Q9HAD4 459 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 PLAC1Q9HBJ0 212 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 SPRR3Q9UBC9 169 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 PTBP2Q9UKA9 531 aaKnown RBP7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 PLEKHA6Q9Y2H5 1048 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 PSAT1Q9Y617 370 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 IKBKGQ9Y6K9 419 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 NCKAP5O14513 1909 aa7.38□□□□□ -1.23
NIF3L1-209ENST00000454952 DOCK7Q96N67 2140 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 CCDC189A1A4V9 331 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 CD8B2A6NJW9 211 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 TAPBPO15533 448 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 FGF17O60258 216 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 CCNT2O60583 730 aaKnown RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 SEC31AO94979 1220 aaKnown RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 TBX6O95947 436 aaPredicted RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 IL18BPO95998 194 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 C1QAP02745 245 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 CCDC166P0CW27 439 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 EPXP11678 715 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 PCNAP12004 261 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 ENDOUP21128 410 aaKnown RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 IVDP26440 423 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 GDF1P27539 372 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 CEACAM8P31997 349 aaPredicted RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 OPRM1P35372 400 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 PIK3CBP42338 1070 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 NR0B1P51843 470 aaKnown RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 NRG3P56975 720 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 EEF1A1P68104 462 aaKnown RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 DR1Q01658 176 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 TNFRSF17Q02223 184 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 ID2Q02363 134 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 PCDH1Q08174 1060 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 PDIA2Q13087 525 aaKnown RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 SLAMF1Q13291 335 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 E2F2Q14209 437 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 NTRK2Q16620 822 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 DEFB113Q30KQ7 82 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 C18orf21Q32NC0 220 aaPredicted RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 C6orf163Q5TEZ5 329 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 PRAMEF20Q5VT98 475 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 EEF1A1P5Q5VTE0 462 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 HLA-DQA1Q5Y7H0 255 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 OR4C11Q6IEV9 310 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 ZNF793Q6ZN11 406 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 UBE3DQ7Z6J8 389 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 C9orf40Q8IXQ3 194 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 ZCCHC7Q8N3Z6 543 aaKnown RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 FBXO36Q8NEA4 188 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 OR10G3Q8NGC4 313 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 STAG3L4Q8TBR4 150 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 SREK1Q8WXA9 508 aaKnown RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 RIT1Q92963 219 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 TP53INP1Q96A56 240 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 ZNF775Q96BV0 537 aaPredicted RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 PWWP2AQ96N64 755 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 ZFP3Q96NJ6 502 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 GAL3ST4Q96RP7 486 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 CPNE1Q99829 537 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 SH3GL2Q99962 352 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 CNPPD1Q9BV87 410 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 CD244Q9BZW8 370 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 WWTR1Q9GZV5 400 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 SLC6A15Q9H2J7 730 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 CALHM2Q9HA72 323 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 NEUROD4Q9HD90 331 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 SEMA4BQ9NPR2 832 aaPredicted RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 DMRT3Q9NQL9 472 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 DLL4Q9NR61 685 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 SNX15Q9NRS6 342 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 LYARQ9NX58 379 aaKnown RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 NUDT4Q9NZJ9 180 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 OPTCQ9UBM4 332 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 CBLCQ9ULV8 474 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 RNF112Q9ULX5 631 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 TSC22D4Q9Y3Q8 395 aa7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 CHCHD2Q9Y6H1 151 aaPredicted RBP7.37□□□□□ -1.23
NIF3L1-209ENST00000454952 MYOCOSA0A1B0GUC4 107 aa7.36□□□□□ -1.23
NIF3L1-209ENST00000454952 C2orf92A0A1B0GVN3 265 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms