RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SUPT3HB4E1H0 165 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 INAFM1C9JVW0 142 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 UBXN8O00124 270 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PLPP1O14494 284 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TP73O15350 636 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TMPRSS11DO60235 418 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HCN1O60741 890 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TRIM3O75382 744 aaPredicted RBP5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SUPT3HO75486 399 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FAM155BO75949 473 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 WISP3O95389 354 aaPredicted RBP5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ACSL3O95573 720 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HRGP04196 525 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FBXO45P0C2W1 286 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CT62P0C5K7 136 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CCDC166P0CW27 439 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NR2F6P10588 404 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 COX7A2P14406 83 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CD53P19397 219 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZNF10P21506 573 aaPredicted RBP5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 IVDP26440 423 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 STT3AP46977 705 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CPA2P48052 419 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HNMTP50135 292 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RAP1GDS1P52306 607 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 IRF9Q00978 393 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 IRF8Q02556 426 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SRYQ05066 204 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MGAT5Q09328 741 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PDIA2Q13087 525 aaKnown RBP5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SLMAPQ14BN4 828 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RPS6KA2Q15349 733 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HSPB2Q16082 182 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HYAL4Q2M3T9 481 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PIGGQ5H8A4 983 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ARMC3Q5W041 872 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SLC22A10Q63ZE4 541 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FAM180BQ6P0A1 224 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RNF111Q6ZNA4 994 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GALNT7Q86SF2 657 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 BIVMQ86UB2 503 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CXorf67Q86X51 503 aaPredicted RBP5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 LACC1Q8IV20 430 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 LRRN4CLQ8ND94 238 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FBXO36Q8NEA4 188 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TTLQ8NG68 377 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 OR5L2Q8NGL0 311 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NUBPLQ8TB37 319 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZNF473Q8WTR7 871 aaKnown RBP5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FAM222BQ8WU58 562 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NANOS1Q8WY41 292 aaKnown RBP5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZNF592Q92610 1267 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ARSGQ96EG1 525 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PERPQ96FX8 193 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 C18orf12Q96KH6 178 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SGCZQ96LD1 299 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TIMP4Q99727 224 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NPLQ9BXD5 320 aaPredicted RBP5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZNF717Q9BY31 904 aaPredicted RBP5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 UGT2B28Q9BY64 529 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RHOJQ9H4E5 214 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 UBTD1Q9HAC8 227 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 LYRM4Q9HD34 91 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SERHLQ9NQF3 203 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MTRF1LQ9UGC7 380 aaKnown RBP5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MAPRE3Q9UPY8 281 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 C15orf41Q9Y2V0 281 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MTO1Q9Y2Z2 717 aaKnown RBP5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TEX264Q9Y6I9 313 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DSCAMO60469 2012 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HEATR5AQ86XA9 2040 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 A0A1W2PR48 441 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 B4DXG7 233 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 H0Y3Z8 333 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SYT5O00445 386 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SNPHO15079 494 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 H2AFYO75367 372 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 STK16O75716 305 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SCELO95171 688 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HEXAP06865 529 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TMIGD3P0DMS9 266 aaPredicted RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GABRA1P14867 456 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CD1DP15813 335 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ALOX15P16050 662 aaPredicted RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 EPB42P16452 691 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 BMP7P18075 431 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HOXC12P31275 282 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CEACAM8P31997 349 aaPredicted RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RPL21P46778 160 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CDK9P50750 372 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NEK2P51955 445 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NAGLUP54802 743 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SLC37A1P57057 533 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RPS13P62277 151 aaKnown RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NKX6-1P78426 367 aaPredicted RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 IGLV3-21P80748 117 aaPredicted RBP5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CDKL1Q00532 357 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TGM3Q08188 693 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DLG1Q12959 904 aa5.47□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SLAMF1Q13291 335 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms