RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 CNOT11Q9UKZ1 510 aaKnown RBP9.03□□□□□ -0.96
UBE2D4-206ENST00000446008 SLC22A14Q9Y267 594 aa9.03□□□□□ -0.96
UBE2D4-206ENST00000446008 ZKSCAN5Q9Y2L8 839 aa9.03□□□□□ -0.96
UBE2D4-206ENST00000446008 LDB3O75112 727 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 H2AFYO75367 372 aaKnown RBP9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 ERN1O75460 977 aaKnown RBP9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 CLEC3AO75596 197 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 CNOT4O95628 575 aaKnown RBP9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 GUCA1CO95843 209 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 TBX6O95947 436 aaPredicted RBP9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 HPNP05981 417 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 C8BP07358 591 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 TMIGD3P0DMS9 266 aaPredicted RBP9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 C1GALT1C1LP0DN25 315 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 GDF1P27539 372 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 SERPINB3P29508 390 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 HPDP32754 393 aaPredicted RBP9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 EIF1AXP47813 144 aaKnown RBP9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 KCNJ1P48048 391 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 PCYT1AP49585 367 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 MTTPP55157 894 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 CDKN2DP55273 166 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 IL2P60568 153 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 ACKR1Q16570 336 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 ALKBH2Q6NS38 261 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 ABHD17CQ6PCB6 329 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 TMIGD1Q6UXZ0 262 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 PHC2Q8IXK0 858 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 C9orf40Q8IXQ3 194 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 C2CD4AQ8NCU7 369 aaPredicted RBP9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 ZPLD1Q8TCW7 415 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 PDLIM5Q96HC4 596 aaKnown RBP9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 SENP5Q96HI0 755 aaPredicted RBP9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 ZNF597Q96LX8 424 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 ZFP3Q96NJ6 502 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 RUNDC3BQ96NL0 473 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 TRIB1Q96RU8 372 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 NDNQ99608 321 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 FAM167BQ9BTA0 163 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 DOHHQ9BU89 302 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 UBQLN3Q9H347 655 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 GALNT8Q9NY28 637 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 CAMK2AQ9UQM7 478 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 NPFFR2Q9Y5X5 522 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 CAPN6Q9Y6Q1 641 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 ABCA1O95477 2261 aa9.02□□□□□ -0.97
UBE2D4-206ENST00000446008 RNF212BA8MTL3 300 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 CTIFO43310 598 aaKnown RBP9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 RCBTB2O95199 551 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 ACSL3O95573 720 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 ROS1P08922 2347 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 NID1P14543 1247 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 PCSK2P16519 638 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 CERS1P27544 350 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 GABRB3P28472 473 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 SOX18P35713 384 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 MAGEA3P43357 314 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 RPL21P46778 160 aaKnown RBP9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 CDK9P50750 372 aaKnown RBP9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 PLA2G16P53816 162 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 IGLV3-21P80748 117 aaPredicted RBP9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 BIKQ13323 160 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 NTRK2Q16620 822 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 PPP1R3AQ16821 1122 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 HSP90AA5PQ58FG0 334 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 RBM20Q5T481 1227 aaKnown RBP9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 ANKRD22Q5VYY1 191 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 TRIM40Q6P9F5 258 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 SBSNQ6UWP8 590 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 ADGRE4PQ86SQ3 457 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 TXLNBQ8N3L3 684 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 RNF10Q8N5U6 811 aaKnown RBP9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 C9orf106Q8NAJ2 232 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 FAM13CQ8NE31 585 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 MCUQ8NE86 351 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 OR10G3Q8NGC4 313 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 GABPB2Q8TAK5 448 aaPredicted RBP9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 MAIP1Q8WWC4 291 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 ANKRD9Q96BM1 317 aaPredicted RBP9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 PERPQ96FX8 193 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 ART5Q96L15 291 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 SIGLEC10Q96LC7 697 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 JSRP1Q96MG2 331 aaPredicted RBP9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 SFXN3Q9BWM7 321 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 UGT2B28Q9BY64 529 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 PITHD1Q9GZP4 211 aaPredicted RBP9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 REXO4Q9GZR2 422 aaKnown RBP9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 PIGMQ9H3S5 423 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 XAB2Q9HCS7 855 aaKnown RBP9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 LYRM4Q9HD34 91 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 PRDM7Q9NQW5 492 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 IARS2Q9NSE4 1012 aaKnown RBP9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 FRRS1LQ9P0K9 344 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 FETUBQ9UGM5 382 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 TESMINQ9Y4I5 508 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 USF3Q68DE3 2245 aa9.01□□□□□ -0.97
UBE2D4-206ENST00000446008 ANKDD1BA6NHY2 528 aa9□□□□□ -0.97
UBE2D4-206ENST00000446008 A8MXE2 369 aa9□□□□□ -0.97
UBE2D4-206ENST00000446008 DEFB108AA8MXU0 73 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms