RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 TUBA8Q9NY65 449 aaPredicted RBP7.32□□□□□ -1.24
LINC02549-201ENST00000445346 COPS7AQ9UBW8 275 aa7.32□□□□□ -1.24
LINC02549-201ENST00000445346 SLC22A14Q9Y267 594 aa7.32□□□□□ -1.24
LINC02549-201ENST00000445346 ATG4BQ9Y4P1 393 aa7.32□□□□□ -1.24
LINC02549-201ENST00000445346 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.32□□□□□ -1.24
LINC02549-201ENST00000445346 CTAGE15A4D2H0 777 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 ANKDD1BA6NHY2 528 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 AHRRA9YTQ3 701 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 C17orf105B2RV13 164 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 CTNSO60931 367 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 ATE1O95260 518 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 CBX7O95931 251 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 ENO2P09104 434 aaPredicted RBP7.31□□□□□ -1.24
LINC02549-201ENST00000445346 CCL3P10147 92 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 HOXC12P31275 282 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 MAGEA6P43360 314 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 HNRNPFP52597 415 aaKnown RBP7.31□□□□□ -1.24
LINC02549-201ENST00000445346 PLA2G16P53816 162 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 NKX6-1P78426 367 aaPredicted RBP7.31□□□□□ -1.24
LINC02549-201ENST00000445346 FOXO1Q12778 655 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 EFTUD2Q15029 972 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC02549-201ENST00000445346 DAZAP2Q15038 168 aaPredicted RBP7.31□□□□□ -1.24
LINC02549-201ENST00000445346 PCBP2Q15366 365 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC02549-201ENST00000445346 HYAL4Q2M3T9 481 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 RBM20Q5T481 1227 aaKnown RBP7.31□□□□□ -1.24
LINC02549-201ENST00000445346 SFRP5Q5T4F7 317 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 TRIM40Q6P9F5 258 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 MAATS1Q7Z4T9 603 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 CTAGE6Q86UF2 777 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC02549-201ENST00000445346 KRT78Q8N1N4 520 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 TMEM52Q8NDY8 209 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 FAM13CQ8NE31 585 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 MCUQ8NE86 351 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 OR14A16Q8NHC5 309 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 PTPMT1Q8WUK0 201 aaPredicted RBP7.31□□□□□ -1.24
LINC02549-201ENST00000445346 MS4A6EQ96DS6 147 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 HRASLS5Q96KN8 279 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 EGFL8Q99944 293 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 SEMA4BQ9NPR2 832 aaPredicted RBP7.31□□□□□ -1.24
LINC02549-201ENST00000445346 PPANQ9NQ55 473 aaKnown RBP7.31□□□□□ -1.24
LINC02549-201ENST00000445346 C19orf73Q9NVV2 129 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 SPRR3Q9UBC9 169 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 BOKQ9UMX3 212 aaPredicted RBP7.31□□□□□ -1.24
LINC02549-201ENST00000445346 PCDHB14Q9Y5E9 798 aa7.31□□□□□ -1.24
LINC02549-201ENST00000445346 MAP1AP78559 2803 aaPredicted RBP7.3□□□□□ -1.24
LINC02549-201ENST00000445346 ZNF469Q96JG9 3925 aaPredicted RBP7.3□□□□□ -1.24
LINC02549-201ENST00000445346 C15orf38-AP3S2A0A0A6YYH1 394 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 LRIT2A6NDA9 550 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 SLC22A31A6NKX4 558 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 C4orf51C9J302 202 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 H3BS24 57 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 CES2O00748 559 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 ARHGEF9O43307 516 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 UBOX5O94941 541 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 EPPINO95925 133 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 C1GALT1C1LP0DN25 315 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 COX7A2P14406 83 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 GNAZP19086 355 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 ENDOUP21128 410 aaKnown RBP7.3□□□□□ -1.24
LINC02549-201ENST00000445346 HNRNPH1P31943 449 aaKnown RBP7.3□□□□□ -1.24
LINC02549-201ENST00000445346 TRPC1P48995 793 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 MTTPP55157 894 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 LIM2P55344 173 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 DCAF7P61962 342 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 TIAL1Q01085 375 aaKnown RBP eCLIP7.3□□□□□ -1.24
LINC02549-201ENST00000445346 TGM3Q08188 693 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 TBL3Q12788 808 aaKnown RBP7.3□□□□□ -1.24
LINC02549-201ENST00000445346 ASPHQ12797 758 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 SERTAD2Q14140 314 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 SF3B4Q15427 424 aaKnown RBP eCLIP7.3□□□□□ -1.24
LINC02549-201ENST00000445346 PIGGQ5H8A4 983 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 PRAMEF20Q5VT98 475 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 SHEQ5VZ18 495 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 TMIGD1Q6UXZ0 262 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 P3H2Q8IVL5 708 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 ULK2Q8IYT8 1036 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 MFSD4AQ8N468 514 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 ZNF321PQ8N8H1 164 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 RELL2Q8NC24 303 aaPredicted RBP7.3□□□□□ -1.24
LINC02549-201ENST00000445346 TNIP2Q8NFZ5 429 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 OR8K3Q8NH51 312 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 NEIL3Q8TAT5 605 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 LINC01560Q8TB33 94 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 SLC22A8Q8TCC7 542 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 SLC2A12Q8TD20 617 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 KIAA1191Q96A73 305 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 SERINC2Q96SA4 455 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 SH3GL2Q99962 352 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 REXO4Q9GZR2 422 aaKnown RBP7.3□□□□□ -1.24
LINC02549-201ENST00000445346 SLC6A15Q9H2J7 730 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 EPB41L4BQ9H329 900 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 BEX4Q9NWD9 120 aaPredicted RBP7.3□□□□□ -1.24
LINC02549-201ENST00000445346 ZNF629Q9UEG4 869 aaPredicted RBP7.3□□□□□ -1.24
LINC02549-201ENST00000445346 DAPP1Q9UN19 280 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 VWA7Q9Y334 891 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 PCDHGB3Q9Y5G1 929 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 SPACA6W5XKT8 324 aa7.3□□□□□ -1.24
LINC02549-201ENST00000445346 FLNAP21333 2647 aaKnown RBP7.29□□□□□ -1.24
LINC02549-201ENST00000445346 SHISA3A0PJX4 238 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms