RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ZNF490Q9ULM2 529 aaPredicted RBP8.18□□□□□ -1.1
USP6NL-203ENST00000443016 PCDHGB6Q9Y5F9 930 aa8.18□□□□□ -1.1
USP6NL-203ENST00000443016 CLCA3PQ9Y6N3 262 aa8.18□□□□□ -1.1
USP6NL-203ENST00000443016 SPACA6W5XKT8 324 aa8.18□□□□□ -1.1
USP6NL-203ENST00000443016 IGKV3D-11A0A0A0MRZ8 115 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 TRBV11-1A0A0K0K1C0 115 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 ZG16O60844 167 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 SUPT7LO94864 414 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 HSPA4LO95757 839 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 CLDN1O95832 211 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 CD22P20273 847 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 MST1P26927 711 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 NAGLUP54802 743 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 LIM2P55344 173 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 ALDH6A1Q02252 535 aaKnown RBP8.17□□□□□ -1.1
USP6NL-203ENST00000443016 PCBP2Q15366 365 aaKnown RBP eCLIP8.17□□□□□ -1.11e-7■■■□□ 16.5
USP6NL-203ENST00000443016 AP5B1Q2VPB7 878 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 ADPRMQ3LIE5 342 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 ZNF678Q5SXM1 525 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 SLC25A25Q6KCM7 469 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 MED27Q6P2C8 311 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 ZNF595Q8IYB9 648 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 MDS2Q8NDY4 140 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 TMEM237Q96Q45 408 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 CENPKQ9BS16 269 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 SUCOQ9UBS9 1254 aaKnown RBP8.17□□□□□ -1.1
USP6NL-203ENST00000443016 DAPP1Q9UN19 280 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 ASB1Q9Y576 335 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 NPIPA5E9PKD4 350 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 PRAMEF4O60810 478 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 TIPRLO75663 272 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 TGFB1P01137 390 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 SP1P08047 785 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 RPS17P08708 135 aaKnown RBP8.17□□□□□ -1.1
USP6NL-203ENST00000443016 TNNI3P19429 210 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 TPP2P29144 1249 aaPredicted RBP8.17□□□□□ -1.1
USP6NL-203ENST00000443016 TERF2Q15554 542 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 TBCCQ15814 346 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 PRAMEF9Q5VWM5 478 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 ZCCHC23Q6ZST2 131 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 VN1R5Q7Z5H4 357 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.17□□□□□ -1.1
USP6NL-203ENST00000443016 RETREG3Q86VR2 466 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 TEX9Q8N6V9 391 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 ZNF75CPQ92670 426 aaPredicted RBP8.17□□□□□ -1.1
USP6NL-203ENST00000443016 WDR34Q96EX3 536 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 MAGED4Q96JG8 741 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 TBCDQ9BTW9 1192 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 GATA5Q9BWX5 397 aaPredicted RBP8.17□□□□□ -1.1
USP6NL-203ENST00000443016 C1QTNF3Q9BXJ4 246 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 ACTR8Q9H981 624 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 ADAM21Q9UKJ8 722 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 NPIPA1Q9UND3 350 aa8.17□□□□□ -1.1
USP6NL-203ENST00000443016 CACNA1DQ01668 2161 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 SAP18O00422 153 aaKnown RBP8.16□□□□□ -1.1
USP6NL-203ENST00000443016 RTCAO00442 366 aaKnown RBP8.16□□□□□ -1.1
USP6NL-203ENST00000443016 CCL21O00585 134 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 SLC19A2O60779 497 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 NEURL1O76050 574 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 TBX6O95947 436 aaPredicted RBP8.16□□□□□ -1.1
USP6NL-203ENST00000443016 VIMP08670 466 aaKnown RBP8.16□□□□□ -1.1
USP6NL-203ENST00000443016 PPP2R1BP30154 601 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 SSR2P43308 183 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 RAP1GDS1P52306 607 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 HNRNPFP52597 415 aaKnown RBP8.16□□□□□ -1.1
USP6NL-203ENST00000443016 ABCE1P61221 599 aaKnown RBP8.16□□□□□ -1.1
USP6NL-203ENST00000443016 BST1Q10588 318 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.16□□□□□ -1.1
USP6NL-203ENST00000443016 TMEM35AQ53FP2 167 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 ZNF468Q5VIY5 522 aaPredicted RBP8.16□□□□□ -1.1
USP6NL-203ENST00000443016 TTC19Q6DKK2 380 aaPredicted RBP8.16□□□□□ -1.1
USP6NL-203ENST00000443016 FRMD7Q6ZUT3 714 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 SCUBE1Q8IWY4 988 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 APCDD1LQ8NCL9 501 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 OR7G3Q8NG95 312 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 ZNF473Q8WTR7 871 aaKnown RBP8.16□□□□□ -1.1
USP6NL-203ENST00000443016 DAZLQ92904 295 aaKnown RBP8.16□□□□□ -1.1
USP6NL-203ENST00000443016 NCLNQ969V3 563 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 ATP6V1E2Q96A05 226 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 CMTM7Q96FZ5 175 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 VMP1Q96GC9 406 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 CSF3RQ99062 836 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 ADAP2Q9NPF8 381 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 THAP1Q9NVV9 213 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 PCTPQ9UKL6 214 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 ADGRG4Q8IZF6 3080 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 CPAMD8Q8IZJ3 1885 aa8.16□□□□□ -1.1
USP6NL-203ENST00000443016 MYOCOSA0A1B0GUC4 107 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 CTNSO60931 367 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 ITGA10O75578 1167 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 SIX3O95343 332 aaPredicted RBP8.15□□□□□ -1.1
USP6NL-203ENST00000443016 ESRRAP11474 423 aaPredicted RBP8.15□□□□□ -1.1
USP6NL-203ENST00000443016 ZNF24P17028 368 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 EPORP19235 508 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 SERPINB1P30740 379 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 LSP1P33241 339 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 SLC1A6P48664 564 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 MLF1P58340 268 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 LCP2Q13094 533 aa8.15□□□□□ -1.1
USP6NL-203ENST00000443016 GTF2H2Q13888 395 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms