RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ULBP3Q9BZM4 244 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 STRADBQ9C0K7 418 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 RACGAP1Q9H0H5 632 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ING2Q9H160 280 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 POLR1BQ9H9Y6 1135 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PLCXD1Q9NUJ7 323 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 TBC1D23Q9NUY8 699 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ATAD3AQ9NVI7 634 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SLC25A37Q9NYZ2 338 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 GIMAP2Q9UG22 337 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 NDOR1Q9UHB4 597 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PSME2Q9UL46 239 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PCDHGB4Q9UN71 923 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PADI2Q9Y2J8 665 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PCDHGB5Q9Y5G0 923 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SNX5Q9Y5X3 404 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 CSNK1G3Q9Y6M4 447 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 A3GALT2U3KPV4 340 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PTPN13Q12923 2485 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 CSMD1Q96PZ7 3565 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 MGAT4DA6NG13 374 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 C10orf142B7Z368 130 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 H3BMQ9 156 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PLOD2O00469 737 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 BTN3A3O00478 584 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 POLR1CO15160 346 aaPredicted RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SLC22A1O15245 554 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 RRP8O43159 456 aaKnown RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 HCRTR1O43613 425 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SGTAO43765 313 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 VEGFDO43915 354 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 TIAF1O95411 115 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SNAP29O95721 258 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SDC1P18827 310 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 MAP4P27816 1152 aaKnown RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 TEAD1P28347 426 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 EMP3P54852 163 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 VAC14Q08AM6 782 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ERV3-1Q14264 604 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 VMACQ2NL98 169 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PTCHD3Q3KNS1 767 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PAGE2BQ5JRK9 111 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SPANXN4Q5MJ08 99 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 KDM4DQ6B0I6 523 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 OR2T5Q6IEZ7 315 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 NOXRED1Q6NXP6 359 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 KCTD8Q6ZWB6 473 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PRSS48Q7RTY5 328 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 GLRX5Q86SX6 157 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 TSPYL5Q86VY4 417 aaPredicted RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 CLVS1Q8IUQ0 354 aaPredicted RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 TMEM151BQ8IW70 566 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 LAS2Q8IYD9 372 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 FAM181AQ8N9Y4 354 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 AVL9Q8NBF6 648 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 CHDHQ8NE62 594 aaPredicted RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 OR52E1Q8NGJ3 308 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 OR2T29Q8NH02 315 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 FNDC8Q8TC99 324 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 KCNE4Q8WWG9 221 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 EXTL1Q92935 676 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PYCR2Q96C36 320 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 NXPE2Q96DL1 559 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 MED8Q96G25 268 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 VMP1Q96GC9 406 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 COG8Q96MW5 612 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 FOPNLQ96NB1 174 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SLC46A1Q96NT5 459 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 MBOAT4Q96T53 435 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 CCM2Q9BSQ5 444 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 YIPF2Q9BWQ6 316 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 GABARAPL3Q9BY60 117 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 CHST8Q9H2A9 424 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 TMEM38AQ9H6F2 299 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 NT5DC2Q9H857 520 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 THSD1Q9NS62 852 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 EVA1BQ9NVM1 165 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SPHK1Q9NYA1 384 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 AKAP7Q9P0M2 348 aaPredicted RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 VPS29Q9UBQ0 182 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PCDHB14Q9Y5E9 798 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 PCDHB11Q9Y5F2 797 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 DNMT3AQ9Y6K1 912 aaPredicted RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 LOC100130705A0A1B0GUX0 176 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SLC5A10A0PJK1 596 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 GPR89AB7ZAQ6 455 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 RFXANKO14593 260 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 GNGT2O14610 69 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SCAMP2O15127 329 aaKnown RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 IFNA14P01570 189 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SERPIND1P05546 499 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 INHBBP09529 407 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 GPR89BP0CG08 455 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 FOLR1P15328 257 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 NCK1P16333 377 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF28P17035 718 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ITGA2P17301 1181 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ACVR2AP27037 513 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 MTPNP58546 118 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ISL1P61371 349 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms