RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 GASTP01350 101 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 AMD1P17707 334 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 TIE1P35590 1138 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 SRP9P49458 86 aaKnown RBP9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 DCDC1P59894 354 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 MESP2Q0VG99 397 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 SSX1Q16384 188 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 CLPPQ16740 277 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 SFTPA1Q8IWL2 248 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 TCEAL8Q8IYN2 117 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 FAM109AQ8N4B1 249 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 AADATQ8N5Z0 425 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 OR7G3Q8NG95 312 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 SLC9A6Q92581 669 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 COL26A1Q96A83 441 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 GAL3ST1Q99999 423 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 SLC35A5Q9BS91 424 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 RNF121Q9H920 327 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 IMP3Q9NV31 184 aaKnown RBP9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 CMAHPQ9Y471 501 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 PCDHGB3Q9Y5G1 929 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 TSC2P49815 1807 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 RALGAPA2Q2PPJ7 1873 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 TRBC2A0A5B9 178 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 DVL2O14641 736 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 FABP7O15540 132 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 CD22P20273 847 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 ITGB8P26012 769 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 VIPR1P32241 457 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 CSTF2P33240 577 aaKnown RBP eCLIP9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 SOX18P35713 384 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 CSNK2BP67870 215 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 OC90Q02509 493 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 C1DQ13901 141 aaKnown RBP9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 CAPN13Q6MZZ7 669 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 ANKRD54Q6NXT1 300 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 CNIH2Q6PI25 160 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 LRRTM4Q86VH4 590 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 OR52P1PQ8NH57 321 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 CMTM7Q96FZ5 175 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 MCCC1Q96RQ3 725 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 NTMT1Q9BV86 223 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 SPHK2Q9NRA0 654 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 ING3Q9NXR8 418 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 CHD7Q9P2D1 2997 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 STOX2Q9P2F5 926 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 PRKAG2Q9UGJ0 569 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 MGAT4AQ9UM21 535 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 NEUROG3Q9Y4Z2 214 aa9.46□□□□□ -0.9
CDC42SE1-202ENST00000439374 B4DXG7 233 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 SSNA1O43805 119 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 PIP5K1CO60331 668 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 ZNF821O75541 412 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 BCHEP06276 602 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 EPHX1P07099 455 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 CPN2P22792 545 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 DGKGP49619 791 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 TBPL1P62380 186 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 PIN1Q13526 163 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 ZNF79Q15937 498 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 MED27Q6P2C8 311 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 SYT9Q86SS6 491 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 FAM124AQ86V42 546 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 TMC8Q8IU68 726 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 LSM14AQ8ND56 463 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 CSGALNACT1Q8TDX6 532 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 IPCEF1Q8WWN9 437 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 OVCA2Q8WZ82 227 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 C11orf24Q96F05 449 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 NARS2Q96I59 477 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 MS4A7Q9GZW8 240 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 SERHLQ9NQF3 203 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 A0A0B4J293 547 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 TRBV4-1A0A0J9YWV2 114 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 CLDN24A6NM45 220 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 TLR4O00206 839 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 RETP07949 1114 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 CSF3P09919 207 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 C8orf89P0DMQ9 161 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 GSTM5P46439 218 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 RPS25P62851 125 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 FAPQ12884 760 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 NCF4Q15080 339 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 TOR2AQ5JU69 321 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 LCN1P1Q5VSP4 162 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 FRMPD2BQ6IN97 320 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 CNKSR3Q6P9H4 555 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 C11orf65Q8NCR3 313 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 GCDHQ92947 438 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 REPS1Q96D71 796 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 RNF31Q96EP0 1072 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 PDLIM5Q96HC4 596 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 TSSK6Q9BXA6 273 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 TM7SF3Q9NS93 570 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 TAC3Q9UHF0 121 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 ERVW-1Q9UQF0 538 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 RUVBL1Q9Y265 456 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 DOCK4Q8N1I0 1966 aa9.45□□□□□ -0.9
CDC42SE1-202ENST00000439374 SNTNA6NMZ2 147 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 H7BY64 318 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms