RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 NACAP1Q9BZK3 213 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 UBXN6Q9BZV1 441 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 CUEDC2Q9H467 287 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 TUFT1Q9NNX1 390 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 CWC25Q9NXE8 425 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 VPS18Q9P253 973 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 IL36AQ9UHA7 158 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 CDH7Q9ULB5 785 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 PLCL2Q9UPR0 1127 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 BPTFQ12830 3046 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 WDR87Q6ZQQ6 2873 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 KIAA1217Q5T5P2 1943 aa2.8□□□□□ -1.96
HMGB3P12-201ENST00000438745 RALGAPA2Q2PPJ7 1873 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 MYO9AB2RTY4 2548 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 C15orf61A6NNL5 157 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 C19orf81C9J6K1 198 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 NPIPA3F8WFD2 350 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 CCER2I3L3R5 266 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 STX6O43752 255 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 ACSL4O60488 711 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 CYTIPO60759 359 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 DUSP11O75319 330 aaKnown RBP2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 SAP30O75446 220 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 CRCPO75575 148 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 CABYRO75952 493 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 GH1P01241 217 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 CALCAP01258 141 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 YES1P07947 543 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 RETP07949 1114 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 CD59P13987 128 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 RBMS1P29558 406 aaKnown RBP2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 ST8SIA6P61647 398 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 EFTUD2Q15029 972 aaKnown RBP eCLIP2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 FAM189A2Q15884 450 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 BSPRYQ5W0U4 402 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 CES4AQ5XG92 561 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 PM20D1Q6GTS8 502 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 APOBEC3HQ6NTF7 200 aaKnown RBP2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 CXCL17Q6UXB2 119 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 CHMP1BQ7LBR1 199 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 CCDC91Q7Z6B0 441 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 AQP12AQ8IXF9 295 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 ZC3H3Q8IXZ2 948 aaKnown RBP2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 MYOCDQ8IZQ8 938 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 PRSS35Q8N3Z0 413 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 FIBINQ8TAL6 211 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 ZNF519Q8TB69 540 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 AFAP1L1Q8TED9 768 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 RFT1Q96AA3 541 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 FAM218AQ96MZ4 157 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 TSSK2Q96PF2 358 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 SLC39A8Q9C0K1 460 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 C5orf66Q9H5L9 145 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 TMEM206Q9H813 350 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 C10orf88Q9H8K7 445 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 SRD5A3Q9H8P0 318 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 IARS2Q9NSE4 1012 aaKnown RBP2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 TMEM161AQ9NX61 479 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 PILRBQ9UKJ0 227 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 SELENOKQ9Y6D0 94 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 CSNK1G3Q9Y6M4 447 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 OTOGLQ3ZCN5 2332 aa2.79□□□□□ -1.96
HMGB3P12-201ENST00000438745 SPEGQ15772 3267 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 MYO18BQ8IUG5 2567 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 ROBO3Q96MS0 1386 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 CLSPNQ9HAW4 1339 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 A0A087WZ39 114 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 FAM170AA1A519 330 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 ILVBLA1L0T0 632 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 SMIM30A4D0T7 59 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 SLC33A1O00400 549 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 ZNF263O14978 683 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 MAGEB2O15479 319 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 MLNRO43193 412 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 CNMDO75829 334 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 MT-ND2P03891 347 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 VTNP04004 478 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 PCCAP05165 728 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 IQCF3P0C7M6 154 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 PRKACGP22612 351 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 AADACP22760 399 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 ATP5DP30049 168 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 SERPINB6P35237 376 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 RDXP35241 583 aaKnown RBP2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 TCF7P36402 384 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 MAGEB1P43366 347 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 BACE1P56817 501 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 OR1D5P58170 312 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 BEX3Q00994 111 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 AKAP17AQ02040 695 aaKnown RBP2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 GUCY2DQ02846 1103 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 CETN1Q12798 172 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 TRA2AQ13595 282 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 ZNF674Q2M3X9 581 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 SNAI3Q3KNW1 292 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 ZNF528Q3MIS6 628 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 LRRC37A5PQ49AS3 106 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 WLSQ5T9L3 541 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 ZNF770Q6IQ21 691 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms