RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 COMTD1Q86VU5 262 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 DENND6BQ8NEG7 585 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 OTUB1Q96FW1 271 aaPredicted RBP9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 C11orf16Q9NQ32 467 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 LHX9Q9NQ69 397 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 IRAK3Q9Y616 596 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 ANKDD1BA6NHY2 528 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 CCNB2O95067 398 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 STATHP02808 62 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 ADRB3P13945 408 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 PIK3CBP42338 1070 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 ST8SIA6P61647 398 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 LSM11P83369 360 aaKnown RBP eCLIP9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 IRF3Q14653 427 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 FRMPD2BQ6IN97 320 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 LACC1Q8IV20 430 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 CELF2-AS1Q8N7Q2 184 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 OR2L2Q8NH16 312 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 LRRC20Q8TCA0 184 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 FCGR1BQ92637 280 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 PAWRQ96IZ0 340 aaKnown RBP9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 TXNDC15Q96J42 360 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 ZNF556Q9HAH1 456 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 KCNN3Q9UGI6 736 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 AP1M2Q9Y6Q5 423 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 HEATR5BQ9P2D3 2071 aa9.89□□□□□ -0.83
CLSTN1-203ENST00000435891 SERPINI2O75830 405 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 SRPRAP08240 638 aaKnown RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 CAMK1Q14012 370 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 FNDC3BQ53EP0 1204 aaKnown RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 C1orf53Q5VUE5 145 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 STEAP3Q658P3 488 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 LYSMD2Q8IV50 215 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 OR8H2Q8N162 312 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 CYP4Z2PQ8N1L4 340 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 CELF5Q8N6W0 485 aaKnown RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 ZNF557Q8N988 423 aaPredicted RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 VANGL1Q8TAA9 524 aaPredicted RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 TM4SF18Q96CE8 201 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 TMEM19Q96HH6 336 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 COL21A1Q96P44 957 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 RAD9AQ99638 391 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 SERHL2Q9H4I8 314 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 RWDD3Q9Y3V2 267 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 PRAMEF27A3QJZ7 478 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 AGAP5A6NIR3 686 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 H7BY64 318 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 IFNW1P05000 195 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 ITGA2P17301 1181 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 PTX3P26022 381 aaPredicted RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 S100A5P33763 92 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 MAPK9P45984 424 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 MED22Q15528 200 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 TCTN3Q6NUS6 607 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 TFGQ92734 400 aaPredicted RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 PDXPQ96GD0 296 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 PRAP1Q96NZ9 151 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 CPNE5Q9HCH3 593 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 TEX10Q9NXF1 929 aaPredicted RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 ANGPT4Q9Y264 503 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 ZAR1LA6NP61 321 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 PI15O43692 258 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 TMPRSS11DO60235 418 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 PRNPP04156 253 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 RPLP0P05388 317 aaKnown RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 RHCEP18577 417 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 ITGB7P26010 798 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 BSGP35613 385 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 UGT2B10P36537 528 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 MAPK12P53778 367 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 CRISP1P54107 249 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 MANFP55145 182 aaKnown RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 HTRA4P83105 476 aaPredicted RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 REEP3Q6NUK4 255 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 C12orf76Q8N812 135 aaPredicted RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 TP53I13Q8NBR0 393 aaPredicted RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 GRPEL2Q8TAA5 225 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 RASSF5Q8WWW0 418 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 EXOSC8Q96B26 276 aaKnown RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 NLNQ9BYT8 704 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 MKRN2Q9H000 416 aaKnown RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 SIRT3Q9NTG7 399 aaPredicted RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 WBP11Q9Y2W2 641 aaKnown RBP9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 A0A0C4DFX4 3053 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 VCANP13611 3396 aa9.88□□□□□ -0.83
CLSTN1-203ENST00000435891 RGS13O14921 159 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 ENTPD6O75354 484 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 PRKRAO75569 313 aaKnown RBP9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 UPK1BO75841 260 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 SPNP16150 400 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 DDCP20711 480 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 CD72P21854 359 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 UQCRC2P22695 453 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 UQCRC1P31930 480 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 CTNNB1P35222 781 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 GALK2Q01415 458 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 GAB4Q2WGN9 574 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 HNRNPA1L2Q32P51 320 aaKnown RBP9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 ATAD3CQ5T2N8 411 aa9.87□□□□□ -0.83
CLSTN1-203ENST00000435891 PTCHD4Q6ZW05 846 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms