RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 TNNI3P19429 210 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 TYK2P29597 1187 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 PTGER4P35408 488 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 SMSP52788 366 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 NUP107P57740 925 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 PLIN5Q00G26 463 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 PIGGQ5H8A4 983 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 DESI1Q6ICB0 168 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 TRILQ7L0X0 811 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 GPALPP1Q8IXQ4 340 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 ST13P4Q8IZP2 240 aaPredicted RBP10.86□□□□□ -0.67
HDAC4-202ENST00000430200 MMGT1Q8N4V1 131 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 GOLM1Q8NBJ4 401 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 LRRN4CLQ8ND94 238 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 SRFBP1Q8NEF9 429 aaKnown RBP10.86□□□□□ -0.67
HDAC4-202ENST00000430200 NUBPLQ8TB37 319 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 SPACA9Q96E40 222 aaPredicted RBP10.86□□□□□ -0.67
HDAC4-202ENST00000430200 GAL3ST4Q96RP7 486 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 UCK2Q9BZX2 261 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 PHF11Q9UIL8 331 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 CNOT11Q9UKZ1 510 aaKnown RBP10.86□□□□□ -0.67
HDAC4-202ENST00000430200 ANGPTL3Q9Y5C1 460 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 PCDHGA11Q9Y5H2 935 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 MED13LQ71F56 2210 aa10.86□□□□□ -0.67
HDAC4-202ENST00000430200 MED12LQ86YW9 2145 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 AKAP6Q13023 2319 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 TRIM49D1C9J1S8 452 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 UGDHO60701 494 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 GPR75O95800 540 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 FBXO45P0C2W1 286 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 ADH7P40394 386 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 PLGLB1Q02325 96 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 GALNT1Q10472 559 aaPredicted RBP10.85□□□□□ -0.67
HDAC4-202ENST00000430200 CUL3Q13618 768 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 RCN2Q14257 317 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 ZNF267Q14586 743 aaPredicted RBP10.85□□□□□ -0.67
HDAC4-202ENST00000430200 WHAMMP3Q1A5X7 153 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 MPEG1Q2M385 716 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 FAM180BQ6P0A1 224 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 ARHGAP11AQ6P4F7 1023 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 FAM47EQ6ZV65 393 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 NUDT13Q86X67 352 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 FAM109AQ8N4B1 249 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 OR4F6Q8NGB9 312 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 PAQR8Q8TEZ7 354 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 ZNF483Q8TF39 744 aaPredicted RBP10.85□□□□□ -0.67
HDAC4-202ENST00000430200 SMC6Q96SB8 1091 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 FMO2Q99518 471 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 FAM173AQ9BQD7 235 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 ENKD1Q9H0I2 346 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 SLC6A15Q9H2J7 730 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 EPB41L4BQ9H329 900 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 CHST11Q9NPF2 352 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 SACM1LQ9NTJ5 587 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 LYARQ9NX58 379 aaKnown RBP10.85□□□□□ -0.67
HDAC4-202ENST00000430200 COPS7AQ9UBW8 275 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 SPACA6W5XKT8 324 aa10.85□□□□□ -0.67
HDAC4-202ENST00000430200 ITPR3Q14573 2671 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 ATP6AP2A0A1C7CYW4 349 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 FOXO6A8MYZ6 492 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 POC1B-GALNT4F8VUJ3 575 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 STX16-NPEPL1H3BU86 382 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 FOXE1O00358 373 aaPredicted RBP10.84□□□□□ -0.67
HDAC4-202ENST00000430200 STX16O14662 325 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 NME6O75414 186 aaPredicted RBP10.84□□□□□ -0.67
HDAC4-202ENST00000430200 ATP6AP2O75787 350 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 TOXO94900 526 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 SEMA3DO95025 777 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 CLDN9O95484 217 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 CHN1P15882 459 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 CNR1P21554 472 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 PTX3P26022 381 aaPredicted RBP10.84□□□□□ -0.67
HDAC4-202ENST00000430200 HTR6P50406 440 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 CDH13P55290 713 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 WNT3P56703 355 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 NNATQ16517 81 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 HYAL4Q2M3T9 481 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 FNDC7Q5VTL7 733 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 FRG2Q64ET8 278 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 OR52E8Q6IFG1 317 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 OPN5Q6U736 354 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 GK5Q6ZS86 529 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 SEM1Q6ZVN7 128 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 COMMD6Q7Z4G1 85 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 CCDC91Q7Z6B0 441 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 LIX1LQ8IVB5 337 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 GSPT2Q8IYD1 628 aaKnown RBP10.84□□□□□ -0.67
HDAC4-202ENST00000430200 PRR22Q8IZ63 422 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 ZNF615Q8N8J6 731 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 OR5M3Q8NGP4 307 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 IFT81Q8WYA0 676 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 TANKQ92844 425 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 TMEM237Q96Q45 408 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 FRG2BQ96QU4 278 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 NTMT1Q9BV86 223 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 TP63Q9H3D4 680 aaPredicted RBP10.84□□□□□ -0.67
HDAC4-202ENST00000430200 CXorf21Q9HAI6 301 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 IL1RL2Q9HB29 575 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 PRM3Q9NNZ6 103 aa10.84□□□□□ -0.67
HDAC4-202ENST00000430200 ADGRE2Q9UHX3 823 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms