RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 MARCH5Q9NX47 278 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 CCDC59Q9P031 241 aaKnown RBP12.04□□□□□ -0.48
CPNE4-201ENST00000429747 EIF3KQ9UBQ5 218 aaKnown RBP12.04□□□□□ -0.48
CPNE4-201ENST00000429747 DPP7Q9UHL4 492 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 MED16Q9Y2X0 877 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 J3QLW9 94 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 ADAMTS4O75173 837 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 HLA-DQA2P01906 255 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 ZNF19P17023 458 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 RNF144AP50876 292 aaPredicted RBP12.04□□□□□ -0.48
CPNE4-201ENST00000429747 CTBSQ01459 385 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 ZNF791Q3KP31 576 aaPredicted RBP12.04□□□□□ -0.48
CPNE4-201ENST00000429747 LINC00471Q8N535 108 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 UBTD2Q8WUN7 234 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 PKMYT1Q99640 499 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 BRF2Q9HAW0 419 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 CARD8Q9Y2G2 431 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 LY75O60449 1722 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 MEIOCA2RUB1 952 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 PLD2O14939 933 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 GASTP01350 101 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 DSG2Q14126 1118 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 TMEM44Q2T9K0 475 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 CCSMST1Q4G0I0 132 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 PARGQ86W56 976 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 SAMD12Q8N8I0 201 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 ATP6V1C2Q8NEY4 427 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 ZNF480Q8WV37 535 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 RERGQ96A58 199 aaPredicted RBP12.04□□□□□ -0.48
CPNE4-201ENST00000429747 ZNF689Q96CS4 500 aaPredicted RBP12.04□□□□□ -0.48
CPNE4-201ENST00000429747 DOK1Q99704 481 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 MCHR1Q99705 422 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 MTIF3Q9H2K0 278 aaKnown RBP12.04□□□□□ -0.48
CPNE4-201ENST00000429747 LINC00597Q9H2U6 94 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 SPHK2Q9NRA0 654 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 TMEFF2Q9UIK5 374 aaPredicted RBP12.04□□□□□ -0.48
CPNE4-201ENST00000429747 NCKAP1Q9Y2A7 1128 aa12.04□□□□□ -0.48
CPNE4-201ENST00000429747 WNK3Q9BYP7 1800 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 UBE2QL1A1L167 161 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 URADA6NGE7 173 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 CACNB4O00305 520 aaPredicted RBP12.03□□□□□ -0.48
CPNE4-201ENST00000429747 FRS3O43559 492 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 OR2B3O76000 313 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 ACADMP11310 421 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 CMPK1P30085 196 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 MTNR1AP48039 350 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 ARL4DP49703 201 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 PRKCDQ05655 676 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 LGALS3BPQ08380 585 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 MAP4K2Q12851 820 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 TRAM2Q15035 370 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 MSRB3Q8IXL7 192 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 OR14C36Q8NHC7 312 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 LRRC20Q8TCA0 184 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 IGFLR1Q9H665 355 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 AKIP1Q9NQ31 210 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 DMRT3Q9NQL9 472 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 HCN2Q9UL51 889 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 EXOSC1Q9Y3B2 195 aaKnown RBP12.03□□□□□ -0.48
CPNE4-201ENST00000429747 NRXN2Q9P2S2 1712 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 C2orf92A0A1B0GVN3 265 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 SOBPA7XYQ1 873 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 IGLV3-27P01718 113 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 IFNA16P05015 189 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 PPP3R1P63098 170 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 SLC14A1Q13336 389 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 GAB1Q13480 694 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 GGTA1PQ4G0N0 100 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 ZNF438Q7Z4V0 828 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 KLBQ86Z14 1044 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 COX18Q8N8Q8 333 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 DOK4Q8TEW6 326 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 CYP17A1P05093 508 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 MRPL3P09001 348 aaKnown RBP12.03□□□□□ -0.48
CPNE4-201ENST00000429747 SLC10A3P09131 477 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 C1SP09871 688 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 HLA-FP30511 346 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 TIAL1Q01085 375 aaKnown RBP eCLIP12.03□□□□□ -0.48
CPNE4-201ENST00000429747 ZNF91Q05481 1191 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 DEFB115Q30KQ5 88 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 PRPF38BQ5VTL8 546 aaKnown RBP12.03□□□□□ -0.48
CPNE4-201ENST00000429747 FAM220AQ7Z4H9 259 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 LAX1Q8IWV1 398 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 TOMM5Q8N4H5 51 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 KCT2Q8NC54 265 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 ZNF740Q8NDX6 193 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 OR5D16Q8NGK9 328 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.03□□□□□ -0.48
CPNE4-201ENST00000429747 GRHL3Q8TE85 626 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 ASB15Q8WXK1 588 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 IKZF2Q9UKS7 526 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 NEU3Q9UQ49 428 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 DOCK1Q14185 1865 aa12.03□□□□□ -0.48
CPNE4-201ENST00000429747 TRBV4-1A0A0J9YWV2 114 aa12.02□□□□□ -0.48
CPNE4-201ENST00000429747 CARNS1A5YM72 827 aa12.02□□□□□ -0.48
CPNE4-201ENST00000429747 ZNF8P17098 575 aaPredicted RBP12.02□□□□□ -0.48
CPNE4-201ENST00000429747 HTR2BP41595 481 aa12.02□□□□□ -0.48
CPNE4-201ENST00000429747 ZNF852Q6ZMS4 543 aa12.02□□□□□ -0.48
CPNE4-201ENST00000429747 FRRS1Q6ZNA5 592 aa12.02□□□□□ -0.48
CPNE4-201ENST00000429747 LINGO2Q7L985 606 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms