RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 AMY2BP19961 511 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 NAA10P41227 235 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-205ENST00000418258 GSK3BP49841 420 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 ZNF584Q8IVC4 421 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 OR9K2Q8NGE7 335 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 TM9SF3Q9HD45 589 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 UNC119BA6NIH7 251 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 FLRT2O43155 660 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 ATF4P18848 351 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-205ENST00000418258 DRD1P21728 446 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 RIDAP52758 137 aaKnown RBP10.74□□□□□ -0.69
PTCH1-205ENST00000418258 RSU1Q15404 277 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 NR0B2Q15466 257 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 BCL2L15Q5TBC7 163 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 KRTCAP2Q8N6L1 136 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 SLC35B2Q8TB61 432 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 LRRC20Q8TCA0 184 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 NPY6RQ99463 290 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 PPP1R14DQ9NXH3 145 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 RPH3AQ9Y2J0 694 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-205ENST00000418258 IL3P08700 152 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 CD79AP11912 226 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 HOXD8P13378 290 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-205ENST00000418258 GTF2F2P13984 249 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 CKMT2P17540 419 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 TUBG1P23258 451 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 MAGEA3P43357 314 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 GRM7Q14831 915 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 XKRXQ6PP77 449 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 DCBLD2Q96PD2 775 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 NANSQ9NR45 359 aa10.74□□□□□ -0.69
PTCH1-205ENST00000418258 NPC1O15118 1278 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 PORP16435 677 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-205ENST00000418258 AK4P27144 223 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-205ENST00000418258 SYNPOQ8N3V7 929 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 BBS10Q8TAM1 723 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 ZNF442Q9H7R0 627 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 NUP205Q92621 2012 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 C1orf226A1L170 272 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 CRYZQ08257 329 aaKnown RBP10.73□□□□□ -0.69
PTCH1-205ENST00000418258 C10orf62Q5T681 223 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-205ENST00000418258 OR51B6Q9H340 312 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 KCNIP1Q9NZI2 227 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 KIF13AQ9H1H9 1805 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 TRAV6A0A075B6T7 132 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 ZNF840PA6NDX5 716 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 PMM2O15305 246 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 SFTPDP35247 375 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 EMC10Q5UCC4 262 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 EEF1A1P5Q5VTE0 462 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 KIAA0100Q14667 2235 aaKnown RBP10.73□□□□□ -0.69
PTCH1-205ENST00000418258 STC2O76061 302 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 GSTM2P28161 218 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 INCA1Q0VD86 236 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 CLCA4Q14CN2 919 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 STK11Q15831 433 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 LRRC37A5PQ49AS3 106 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 HSD17B12Q53GQ0 312 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 DUS1LQ6P1R4 473 aaKnown RBP10.73□□□□□ -0.69
PTCH1-205ENST00000418258 HINT2Q9BX68 163 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 CLEC4EQ9ULY5 219 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 DOT1LQ8TEK3 1739 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 ATG2BQ96BY7 2078 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 ABLIM1O14639 778 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 IFNA2P01563 188 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 IFNA7P01567 189 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 SHC2P98077 582 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 SLC18A2Q05940 514 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 EXOC3L2Q2M3D2 409 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 APCDD1Q8J025 514 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 IL17FQ96PD4 163 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 NUP188Q5SRE5 1749 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 BEST1O76090 585 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 ADRB3P13945 408 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 EPHA4P54764 986 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 KCNC4Q03721 635 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 ASTE1Q2TB18 679 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-205ENST00000418258 EPGNQ6UW88 154 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.73□□□□□ -0.69
PTCH1-205ENST00000418258 OR52P1PQ8NH57 321 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 WDR20Q8TBZ3 569 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 PEBP4Q96S96 227 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 CDH20Q9HBT6 801 aa10.73□□□□□ -0.69
PTCH1-205ENST00000418258 EXOSC1Q9Y3B2 195 aaKnown RBP10.73□□□□□ -0.69
PTCH1-205ENST00000418258 ANKRD28O15084 1053 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 SLC16A5O15375 505 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 PSMA6P60900 246 aaKnown RBP10.72□□□□□ -0.69
PTCH1-205ENST00000418258 HTRA3P83110 453 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 NFE2L1Q14494 772 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 TMEM201Q5SNT2 666 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 ATAD3CQ5T2N8 411 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 OR4N5Q8IXE1 308 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 F2RL3Q96RI0 385 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 FBRSQ9HAH7 460 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 NENFQ9UMX5 172 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 LIPT1Q9Y234 373 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 TTC3P53804 2025 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 GPR32O75388 356 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 MELKQ14680 651 aa10.72□□□□□ -0.69
PTCH1-205ENST00000418258 CDNFQ49AH0 187 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms