RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 NCK1P16333 377 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 G0S2P27469 103 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 HNRNPKP61978 463 aaKnown RBP eCLIP19.43■□□□□ 0.7
AP1S3-205ENST00000415298 FCN2Q15485 313 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 NCBP2-AS2Q69YL0 99 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 BTN2A2Q8WVV5 523 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 FCRL3Q96P31 734 aaPredicted RBP19.43■□□□□ 0.7
AP1S3-205ENST00000415298 AGAP2Q99490 1192 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 DDX31Q9H8H2 851 aaKnown RBP19.43■□□□□ 0.7
AP1S3-205ENST00000415298 MAP10Q9P2G4 905 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 V9GYQ6 96 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 MYOFQ9NZM1 2061 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 KIAA0513O60268 411 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 PLOD3O60568 738 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 TULP3O75386 442 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 MBP02144 154 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 MPOP05164 745 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 NMBP08949 121 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 LHCGRP22888 699 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 SLC6A2P23975 617 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 CD86P42081 329 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 PTGFRP43088 359 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 RPS24P62847 133 aaKnown RBP19.43■□□□□ 0.7
AP1S3-205ENST00000415298 RBMS2Q15434 407 aaKnown RBP19.43■□□□□ 0.7
AP1S3-205ENST00000415298 ATAT1Q5SQI0 421 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 FAM131AQ6UXB0 335 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 GLCCI1Q86VQ1 547 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 NPWQ8N729 165 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 RSPRY1Q96DX4 576 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 ZC3H10Q96K80 434 aaKnown RBP19.43■□□□□ 0.7
AP1S3-205ENST00000415298 MSLNLQ96KJ4 702 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 GHRLQ9UBU3 117 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 PCDHGC4Q9Y5F7 938 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 PCDHGB7Q9Y5F8 929 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 PCDHGA6Q9Y5G7 932 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 PCDHGA5Q9Y5G8 931 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 PCDHGA1Q9Y5H4 931 aa19.43■□□□□ 0.7
AP1S3-205ENST00000415298 FAM240BA0A1B0GVZ2 78 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 GPR171O14626 319 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 EFNA1P20827 205 aaPredicted RBP19.42■□□□□ 0.7
AP1S3-205ENST00000415298 TACR2P21452 398 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 PTBP1P26599 531 aaKnown RBP eCLIP19.42■□□□□ 0.7
AP1S3-205ENST00000415298 SLC11A2P49281 568 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 NR0B1P51843 470 aaKnown RBP19.42■□□□□ 0.7
AP1S3-205ENST00000415298 SMSP52788 366 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 ILKQ13418 452 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 LAIR1Q6GTX8 287 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 PABPC5Q96DU9 382 aaKnown RBP19.42■□□□□ 0.7
AP1S3-205ENST00000415298 MTERF3Q96E29 417 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 COL21A1Q96P44 957 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 SLC38A2Q96QD8 506 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 GPR61Q9BZJ8 451 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 MED28Q9H204 178 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 EVA1AQ9H8M9 152 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 DOCK8Q8NF50 2099 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 VCANP13611 3396 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 C9orf170A2RU37 121 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 AGRPO00253 132 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 KPNA3O00505 521 aaPredicted RBP19.42■□□□□ 0.7
AP1S3-205ENST00000415298 DCLK1O15075 740 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 PEX11BO96011 259 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 OR56A5P0C7T3 313 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 FAM157BP0CG42 384 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 ANXA3P12429 323 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 CYP4B1P13584 511 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 GSK3BP49841 420 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 TP53BP2Q13625 1128 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 USP10Q14694 798 aaKnown RBP19.42■□□□□ 0.7
AP1S3-205ENST00000415298 ZNF284Q2VY69 593 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 FBXO48Q5FWF7 155 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 FAM78AQ5JUQ0 283 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 Q6ZNB5 142 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 IFNEQ86WN2 208 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 ZNF655Q8N720 491 aaPredicted RBP19.42■□□□□ 0.7
AP1S3-205ENST00000415298 WDR20Q8TBZ3 569 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 GUCD1Q96NT3 240 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 LINC00597Q9H2U6 94 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 NMRAL1Q9HBL8 299 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 ACSS2Q9NR19 701 aa19.42■□□□□ 0.7
AP1S3-205ENST00000415298 GLYATL1P3A0A0U1RQE8 302 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 PHYHO14832 338 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 STX11O75558 287 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 CDH4P55283 916 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 SNRPEP62304 92 aaKnown RBP19.41■□□□□ 0.7
AP1S3-205ENST00000415298 ADGRF1Q5T601 910 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 LAX1Q8IWV1 398 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 HGDQ93099 445 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 MRPS24Q96EL2 167 aaKnown RBP19.41■□□□□ 0.7
AP1S3-205ENST00000415298 POMKQ9H5K3 350 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 SLC17A6Q9P2U8 582 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 NLKQ9UBE8 527 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 DOCK4Q8N1I0 1966 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 ANKRD28O15084 1053 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 PAK4O96013 591 aaPredicted RBP19.41■□□□□ 0.7
AP1S3-205ENST00000415298 FHP07954 510 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 HAGHLQ6PII5 290 aaPredicted RBP19.41■□□□□ 0.7
AP1S3-205ENST00000415298 RNF113BQ8IZP6 322 aaKnown RBP19.41■□□□□ 0.7
AP1S3-205ENST00000415298 DEFB123Q8N688 67 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 OR9I1Q8NGQ6 314 aa19.41■□□□□ 0.7
AP1S3-205ENST00000415298 SOX7Q9BT81 388 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms