RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 SRRQ9GZT4 340 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 MIXL1Q9H2W2 232 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 TMEM245Q9H330 911 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 DPEP2Q9H4A9 486 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 NEUROD4Q9HD90 331 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 SH2B3Q9UQQ2 575 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 YARS2Q9Y2Z4 477 aaKnown RBP9.3□□□□□ -0.92
CD44-206ENST00000415148 CMAHPQ9Y471 501 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 MYOFQ9NZM1 2061 aa9.3□□□□□ -0.92
CD44-206ENST00000415148 CENPBD1B2RD01 187 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 SEC14L5O43304 696 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 LILRB5O75023 590 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 SEMA7AO75326 666 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 CYP17A1P05093 508 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 HBQ1P09105 142 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 ELFN1P0C7U0 828 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 DDX6P26196 483 aaKnown RBP eCLIP9.29□□□□□ -0.92
CD44-206ENST00000415148 FRKP42685 505 aaPredicted RBP9.29□□□□□ -0.92
CD44-206ENST00000415148 KCNJ5P48544 419 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 DAB2P98082 770 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 CD83Q01151 205 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 BNC1Q01954 994 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 SCN1BQ07699 218 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 CNTN1Q12860 1018 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 HEPACAMQ14CZ8 416 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 NDUFA9Q16795 377 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 SMUG1Q53HV7 270 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 ARMC4Q5T2S8 1044 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 KIAA1211LQ6NV74 962 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 CNKSR3Q6P9H4 555 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 PAMR1Q6UXH9 720 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 TMIGD1Q6UXZ0 262 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 HSDL2Q6YN16 418 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 CADM2Q8N3J6 435 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 HORMAD2Q8N7B1 307 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 GPR32P1Q8NGA4 272 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 ZFYVE19Q96K21 471 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 DEPDC7Q96QD5 511 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 ZNF607Q96SK3 696 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 MED18Q9BUE0 208 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 POLR2J2Q9GZM3 115 aaKnown RBP9.29□□□□□ -0.92
CD44-206ENST00000415148 POLR2J3Q9H1A7 115 aaKnown RBP9.29□□□□□ -0.92
CD44-206ENST00000415148 RHBGQ9H310 441 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 ISYNA1Q9NPH2 558 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 SPHK2Q9NRA0 654 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 TMEM39AQ9NV64 488 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 HCN2Q9UL51 889 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 DIMT1Q9UNQ2 313 aaKnown RBP9.29□□□□□ -0.92
CD44-206ENST00000415148 SNX11Q9Y5W9 270 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 IRGMA1A4Y4 181 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 HMX3A6NHT5 357 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 CENPXA8MT69 81 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 OR10H3O60404 316 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 TPST2O60704 377 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 TYRP14679 529 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 CPEP16870 476 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 SYN1P17600 705 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 PBLDP30039 288 aaPredicted RBP9.29□□□□□ -0.92
CD44-206ENST00000415148 GPLD1P80108 840 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 SEC23BQ15437 767 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 TMEM215Q68D42 235 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 LILRA6Q6PI73 481 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 XKRXQ6PP77 449 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 ZNF765Q7L2R6 523 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 DEFB128Q7Z7B8 93 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 FAM129CQ86XR2 697 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 MYLIPQ8WY64 445 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 TMEM203Q969S6 136 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 SLC25A46Q96AG3 418 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 KIAA1143Q96AT1 154 aaPredicted RBP9.29□□□□□ -0.92
CD44-206ENST00000415148 MSLNLQ96KJ4 702 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 COQ10AQ96MF6 247 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 QRFPRQ96P65 431 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 POLDIP3Q9BY77 421 aaKnown RBP9.29□□□□□ -0.92
CD44-206ENST00000415148 MCOLN1Q9GZU1 580 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 C11orf54Q9H0W9 315 aaPredicted RBP9.29□□□□□ -0.92
CD44-206ENST00000415148 MRPS18AQ9NVS2 196 aaKnown RBP9.29□□□□□ -0.92
CD44-206ENST00000415148 GPR34Q9UPC5 381 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 KLHL20Q9Y2M5 609 aa9.29□□□□□ -0.92
CD44-206ENST00000415148 KIF26AQ9ULI4 1882 aaPredicted RBP9.29□□□□□ -0.92
CD44-206ENST00000415148 SMLR1H3BR10 107 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 TNFRSF10AO00220 468 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 STK25O00506 426 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 TPD52L2O43399 206 aaKnown RBP9.28□□□□□ -0.92
CD44-206ENST00000415148 FGF19O95750 216 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 BCHEP06276 602 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 CTSLP07711 333 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 GJA1P17302 382 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 ACADLP28330 430 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 MANFP55145 182 aaKnown RBP9.28□□□□□ -0.92
CD44-206ENST00000415148 CAV3P56539 151 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 PCBP4P57723 403 aaKnown RBP9.28□□□□□ -0.92
CD44-206ENST00000415148 LSM11P83369 360 aaKnown RBP eCLIP9.28□□□□□ -0.92
CD44-206ENST00000415148 ZNF91Q05481 1191 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 ASAH1Q13510 395 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 LARS2Q15031 903 aaKnown RBP9.28□□□□□ -0.92
CD44-206ENST00000415148 MLC1Q15049 377 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 KLHL22Q53GT1 634 aa9.28□□□□□ -0.92
CD44-206ENST00000415148 RPS26P11Q5JNZ5 115 aaPredicted RBP9.28□□□□□ -0.92
CD44-206ENST00000415148 PGBD2Q6P3X8 592 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms