RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 DPPA5A6NC42 116 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 EN2P19622 333 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-202ENST00000413872 ECHS1P30084 290 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 OR1E2P47887 323 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 ERVPABLB-1P60509 514 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 SH3BP2P78314 561 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 NDUFAF5Q5TEU4 345 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 OGFOD2Q6N063 350 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 LNX2Q8N448 690 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 NSMAFQ92636 917 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 NPLQ9BXD5 320 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-202ENST00000413872 KCNK13Q9HB14 408 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 RHCGQ9UBD6 479 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 S1PR1P21453 382 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 ITGA3P26006 1051 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 HOXD9P28356 352 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-202ENST00000413872 CD38P28907 300 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 SIM1P81133 766 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-202ENST00000413872 TRAM1Q15629 374 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 EGFLAMQ63HQ2 1017 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 METTL25Q8N6Q8 603 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 MDGA1Q8NFP4 955 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 GAL3ST3Q96A11 431 aa16.49■□□□□ 0.23
PHRF1-202ENST00000413872 DDX60Q8IY21 1712 aaKnown RBP16.49■□□□□ 0.23
PHRF1-202ENST00000413872 TEX13CA0A0J9YWL9 993 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 CCNKO75909 580 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 ITGA5P08648 1049 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 SLC3A1Q07837 685 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 SLC15A3Q8IY34 581 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 GATSQ8NAP1 163 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 OR10Q1Q8NGQ4 319 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 SGCDQ92629 289 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 UBAP1Q9NZ09 502 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 HS3ST2Q9Y278 367 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 RLN2P04090 185 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 HCKP08631 526 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 PGAM2P15259 253 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 MPP2Q14168 576 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 MFSD13AQ14CX5 517 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 OR7G3Q8NG95 312 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 ECHDC3Q96DC8 303 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 CWH43Q9H720 699 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 MTMR10Q9NXD2 777 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF639Q9UID6 485 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 BAIAP2Q9UQB8 552 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 CDH10Q9Y6N8 788 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 MYH7P12883 1935 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 EIF1AXP47813 144 aaKnown RBP16.48■□□□□ 0.23
PHRF1-202ENST00000413872 OR2B6P58173 313 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 POU4F2Q12837 409 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 NFATC4Q14934 902 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 C1orf189Q5VU69 101 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 ERMAPQ96PL5 475 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-202ENST00000413872 DCSTAMPQ9H295 470 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 FBXO9Q9UK97 447 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-202ENST00000413872 ACTL7AQ9Y615 435 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 GJE1A6NN92 205 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 HIDE1A8MVS5 230 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 NOS1APO75052 506 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-202ENST00000413872 SNNO75324 88 aaPredicted RBP16.48■□□□□ 0.23
PHRF1-202ENST00000413872 INMTO95050 263 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 APOC1P02654 83 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 IRF4Q15306 451 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 PAQR9Q6ZVX9 377 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 ANKRD33Q7Z3H0 272 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 ARFGAP1Q8N6T3 406 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 MRPL38Q96DV4 380 aaKnown RBP16.48■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF576Q9H609 170 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 TREX1Q9NSU2 369 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF221Q9UK13 617 aa16.48■□□□□ 0.23
PHRF1-202ENST00000413872 BLACEA4D250 179 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 TTLL8A6PVC2 850 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 HLA-FP30511 346 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 TSTQ16762 297 aaKnown RBP16.47■□□□□ 0.23
PHRF1-202ENST00000413872 LARP4Q71RC2 724 aaKnown RBP eCLIP16.47■□□□□ 0.23
PHRF1-202ENST00000413872 CDRT4Q8N9R6 151 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 OR6N2Q8NGY6 317 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 GAL3ST1Q99999 423 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 A0A1W2PPL8 197 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 BRINP1O60477 761 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF12P17014 697 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 ERVFC1P60507 584 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 CSTF1Q05048 431 aaKnown RBP16.47■□□□□ 0.23
PHRF1-202ENST00000413872 GAS6Q14393 721 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 RAET1LQ5VY80 246 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 ASB15Q8WXK1 588 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 TANKQ92844 425 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 NXPE2Q96DL1 559 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 CD72P21854 359 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 IL4RP24394 825 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 SF3B4Q15427 424 aaKnown RBP eCLIP16.47■□□□□ 0.233e-7■■■■□ 22.9
PHRF1-202ENST00000413872 ZFP69Q49AA0 526 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 ABHD17BQ5VST6 288 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 ARHGAP11AQ6P4F7 1023 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 TREML1Q86YW5 311 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF283Q8N7M2 679 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 MS4A4EQ96PG1 132 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 MARCH5Q9NX47 278 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 TMEM9Q9P0T7 183 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 F11P03951 625 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms