RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 SENP5Q96HI0 755 aaPredicted RBP13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 WACQ9BTA9 647 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 ANKRA2Q9H9E1 313 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 C5orf58C9J3I9 102 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 ANHXE9PGG2 379 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 CA12O43570 354 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 ZNF780AO75290 641 aaPredicted RBP13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 ARAFP10398 606 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 NPPBP16860 134 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 AP1S2P56377 157 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 RHAGQ02094 409 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 CHRNEQ04844 493 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 GPR19Q15760 415 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 SLC8B1Q6J4K2 584 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 C22orf39Q6P5X5 142 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 ASB18Q6ZVZ8 466 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 RDH10Q8IZV5 341 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 ZFPM2Q8WW38 1151 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 EXOSC8Q96B26 276 aaKnown RBP13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 SYT17Q9BSW7 474 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 MND1Q9BWT6 205 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 CDCP1Q9H5V8 836 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 MIEF1Q9NQG6 463 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 GULP1Q9UBP9 304 aa13.84□□□□□ -0.19
SEMA3F-202ENST00000413852 PRAMEF27A3QJZ7 478 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 CD8B2A6NJW9 211 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 GLOD5A6NK44 160 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 POLR1CO15160 346 aaPredicted RBP13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 SOCS5O75159 536 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 PSIP1O75475 530 aaKnown RBP13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 TP53P04637 393 aaPredicted RBP13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 URODP06132 367 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 MPC1LP0DKB6 136 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 CD8BP10966 210 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 FAPQ12884 760 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 IL18Q14116 193 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 CRB2Q5IJ48 1285 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 PLEKHS1Q5SXH7 462 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 SPOUT1Q5T280 376 aaKnown RBP13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 PODNL1Q6PEZ8 512 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 DEFB128Q7Z7B8 93 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 IQCHQ86VS3 1027 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 ELMOD2Q8IZ81 293 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 Q8N402 240 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 AMER3Q8N944 861 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 SIMC1Q8NDZ2 872 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 OTULINQ96BN8 352 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 MACROD1Q9BQ69 325 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 TEKT2Q9UIF3 430 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 CORO2BQ9UQ03 480 aa13.83□□□□□ -0.19
SEMA3F-202ENST00000413852 SH3D21A4FU49 640 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 K7ESM1 405 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 EPHX1P07099 455 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 GSTM1P09488 218 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 PPIBP23284 216 aaKnown RBP13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 GABRR2P28476 465 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 RNF144AP50876 292 aaPredicted RBP13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 HMGA2P52926 109 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 PRKAG1P54619 331 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 SNRPD1P62314 119 aaKnown RBP13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 SYT14P1Q58G82 188 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 TMEM25Q86YD3 366 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 OXR1Q8N573 874 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 POP5Q969H6 163 aaKnown RBP13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 ARSGQ96EG1 525 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 BHLHE41Q9C0J9 482 aaPredicted RBP13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 SLC23A1Q9UHI7 598 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 ANGPT4Q9Y264 503 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 PIPSLA2A3N6 862 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 SLC2A2P11168 524 aaPredicted RBP13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 MMP11P24347 488 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 AGFG1P52594 562 aaKnown RBP13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 FKBP1BP68106 108 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 ASAH1Q13510 395 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 SPIN4Q56A73 249 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 SDE2Q6IQ49 451 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 TTC23LQ6PF05 361 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 PLET1Q6UQ28 207 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 SETD6Q8TBK2 473 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 XAGE5Q8WWM1 108 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 MTERF3Q96E29 417 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 MAP6Q96JE9 813 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 DMRT3Q9NQL9 472 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 KCNE2Q9Y6J6 123 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 MYO15AQ9UKN7 3530 aa13.83□□□□□ -0.2
SEMA3F-202ENST00000413852 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 FEZF1A0PJY2 475 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 ISM1B1AKI9 464 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 CASKO14936 926 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 LANCL1O43813 399 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 CRYZL1O95825 349 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 CYP2A6P11509 494 aaPredicted RBP13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 FCHO2Q0JRZ9 810 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 GRIN2CQ14957 1233 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 SNAPC1Q16533 368 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 ARSIQ5FYB1 569 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 LAMTOR1Q6IAA8 161 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 FAM71E1Q6IPT2 247 aa13.82□□□□□ -0.2
SEMA3F-202ENST00000413852 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms