RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 S100PBPQ96BU1 408 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 RCC1LQ96I51 464 aaKnown RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 WDFY2Q96P53 400 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 HSD17B14Q9BPX1 270 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 REEP2Q9BRK0 252 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 RBCK1Q9BYM8 510 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 BCO1Q9HAY6 547 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 C3orf14Q9HBI5 128 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SMURF1Q9HCE7 757 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 RAB20Q9NX57 234 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 RBAKQ9NYW8 714 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 SAE1Q9UBE0 346 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 FEM1BQ9UK73 627 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SLC27A6Q9Y2P4 619 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 PCDHA11Q9Y5I1 949 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 V9GYH0 126 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 MAGEB6P1A0A0J9YX57 407 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 A0A1W2PQ09 198 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 DHRS12A0PJE2 317 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 TMEM200CA6NKL6 621 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 ATXN7O15265 892 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 COCHO43405 550 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 DOK2O60496 412 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 IL1AP01583 271 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SNRPB2P08579 225 aaKnown RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 BMP3P12645 472 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 DPEP1P16444 411 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 IL7RP16871 459 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 TBXA2RP21731 343 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 ZNF143P52747 638 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 RAB25P57735 213 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 MAXP61244 160 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SPP2Q13103 211 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 MAD2L1Q13257 205 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 EXOC3L2Q2M3D2 409 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 FAM102BQ5T8I3 360 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 HACD4Q5VWC8 232 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 IL27RAQ6UWB1 636 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 ZNF813Q6ZN06 617 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 RIMKLAQ8IXN7 391 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 DDIASQ8IXT1 998 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 TCTEX1D2Q8WW35 142 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 KREMEN1Q96MU8 473 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SLC30A3Q99726 388 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 EBNA1BP2Q99848 306 aaKnown RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 HOPXQ9BPY8 73 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 KCNS3Q9BQ31 491 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 NT5C1AQ9BXI3 368 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 CSTL1Q9H114 145 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 SMOC1Q9H4F8 434 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 DUSP21Q9H596 190 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 PPP1R3EQ9H7J1 279 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 UBE2TQ9NPD8 197 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 CHST11Q9NPF2 352 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 ZDHHC2Q9UIJ5 367 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 INTS6Q9UL03 887 aaKnown RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 LHX6Q9UPM6 363 aa4.99□□□□□ -1.61
HERC4-205ENST00000412272 COLQQ9Y215 455 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 ATF5Q9Y2D1 282 aaPredicted RBP4.99□□□□□ -1.61
HERC4-205ENST00000412272 NUP98P52948 1817 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 TBC1D3KA0A087X1G2 549 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 CXorf49A8MYA2 514 aaPredicted RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 G3V2L1 256 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 NUDT21O43809 227 aaKnown RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 RGS9O75916 674 aaPredicted RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 KRT33AO76009 404 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 FAM157BP0CG42 384 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 KLRK1P26718 216 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 DPYSL3Q14195 570 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 RPS6KA2Q15349 733 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 CNN3Q15417 329 aaKnown RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 INPP5JQ15735 1006 aaPredicted RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 ZNF79Q15937 498 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 NDUFAF6Q330K2 333 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 DCAF10Q5QP82 559 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 C10orf107Q8IVU9 208 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 PUSL1Q8N0Z8 303 aaKnown RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 BEND2Q8NDZ0 799 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 CANT1Q8WVQ1 401 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 FCGR1BQ92637 280 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 NUDT11Q96G61 164 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 SLC38A2Q96QD8 506 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 RUSC1Q9BVN2 902 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 EGLN1Q9GZT9 426 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 MCOLN1Q9GZU1 580 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 ACTL8Q9H568 366 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 SNTG1Q9NSN8 517 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 ZNF225Q9UK10 706 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 GJD2Q9UKL4 321 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 POFUT2Q9Y2G5 429 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 ZNF281Q9Y2X9 895 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 TCRBV7S3A2A0A539 114 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 EFCAB9A8MZ26 197 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 EI24O14681 340 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 RPP40O75818 363 aaKnown RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 PIAS1O75925 651 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 CYB5R3P00387 301 aaPredicted RBP4.98□□□□□ -1.61
HERC4-205ENST00000412272 EGFP01133 1207 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 CYBBP04839 570 aa4.98□□□□□ -1.61
HERC4-205ENST00000412272 ERCC1P07992 297 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms