RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PCBD2Q9H0N5 130 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 ZSCAN32Q9NX65 697 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 DNAJC27Q9NZQ0 273 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 TESQ9UGI8 421 aaKnown RBP15.82■□□□□ 0.12
LIMS2-208ENST00000410011 A4GNTQ9UNA3 340 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 H3BN98 237 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 SLC9A3R1O14745 358 aaPredicted RBP15.82■□□□□ 0.12
LIMS2-208ENST00000410011 B4GALT2O60909 372 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 KRT8P05787 483 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 SOX3P41225 446 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 TRA2BP62995 288 aaKnown RBP15.82■□□□□ 0.12
LIMS2-208ENST00000410011 MMAAQ8IVH4 418 aaKnown RBP15.82■□□□□ 0.12
LIMS2-208ENST00000410011 LMNTD1Q8N9Z9 388 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 FGF11Q92914 225 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 SLC25A46Q96AG3 418 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 MSLNLQ96KJ4 702 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 EXOSC4Q9NPD3 245 aaKnown RBP15.82■□□□□ 0.12
LIMS2-208ENST00000410011 ISYNA1Q9NPH2 558 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 SEMA3GQ9NS98 782 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 C14orf119Q9NWQ9 140 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 ASF1AQ9Y294 204 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 IRAK3Q9Y616 596 aa15.82■□□□□ 0.12
LIMS2-208ENST00000410011 TTC36A6NLP5 189 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 K7ESM1 405 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 KPNA3O00505 521 aaPredicted RBP15.81■□□□□ 0.12
LIMS2-208ENST00000410011 KIAA0355O15063 1070 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 EFCAB14O75071 495 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 ACADMP11310 421 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 CKMT1AP12532 417 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 CPEP16870 476 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 OPRD1P41143 372 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 RPS26P62854 115 aaKnown RBP15.81■□□□□ 0.12
LIMS2-208ENST00000410011 NFE2L1Q14494 772 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 SF3B4Q15427 424 aaKnown RBP eCLIP15.81■□□□□ 0.12
LIMS2-208ENST00000410011 POM121L1PQ3SYA9 428 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 C1orf53Q5VUE5 145 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 RAET1GQ6H3X3 334 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 TCEANCQ8N8B7 351 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 OR4D11Q8NGI4 311 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 MED18Q9BUE0 208 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 SRRQ9GZT4 340 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 SEC14L3Q9UDX4 400 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 MUTYHQ9UIF7 546 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 CCDC88CQ9P219 2028 aa15.81■□□□□ 0.12
LIMS2-208ENST00000410011 IRGMA1A4Y4 181 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 ANHXE9PGG2 379 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 STK25O00506 426 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 FEN1P39748 380 aaKnown RBP15.8■□□□□ 0.12
LIMS2-208ENST00000410011 RPS5P46782 204 aaKnown RBP15.8■□□□□ 0.12
LIMS2-208ENST00000410011 CCT3P49368 545 aaKnown RBP15.8■□□□□ 0.12
LIMS2-208ENST00000410011 ST8SIA6P61647 398 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 TARDBPQ13148 414 aaKnown RBP eCLIP15.8■□□□□ 0.12
LIMS2-208ENST00000410011 LARS2Q15031 903 aaKnown RBP15.8■□□□□ 0.12
LIMS2-208ENST00000410011 ZNF79Q15937 498 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 HSDL2Q6YN16 418 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 NRARPQ7Z6K4 114 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 OR8H2Q8N162 312 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 ANKRD53Q8N9V6 530 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 TREX2Q9BQ50 279 aaPredicted RBP15.8■□□□□ 0.12
LIMS2-208ENST00000410011 BCL2L10Q9HD36 194 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 P2RX2Q9UBL9 471 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 ZNF221Q9UK13 617 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 SLC27A6Q9Y2P4 619 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 CMAHPQ9Y471 501 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 FAM47E-STBD1D6RA91 191 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 MYL12BO14950 172 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 SOX14O95416 240 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 IGFBP1P08833 259 aaPredicted RBP15.8■□□□□ 0.12
LIMS2-208ENST00000410011 GIPRP48546 466 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 CDK5Q00535 292 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 TRIM60Q495X7 471 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 GLYR1Q49A26 553 aaPredicted RBP15.8■□□□□ 0.12
LIMS2-208ENST00000410011 KLHL22Q53GT1 634 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 C3orf38Q5JPI3 329 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 ENTPD8Q5MY95 495 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 RSBN1Q5VWQ0 802 aaPredicted RBP15.8■□□□□ 0.12
LIMS2-208ENST00000410011 C1orf94Q6P1W5 598 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 DEF8Q6ZN54 512 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 SPATC1Q76KD6 591 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 NUDT13Q86X67 352 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 VANGL1Q8TAA9 524 aaPredicted RBP15.8■□□□□ 0.12
LIMS2-208ENST00000410011 GPR151Q8TDV0 419 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 WNT6Q9Y6F9 365 aa15.8■□□□□ 0.12
LIMS2-208ENST00000410011 FAM172BPA6NC97 362 aa15.79■□□□□ 0.12
LIMS2-208ENST00000410011 RGS5O15539 181 aa15.79■□□□□ 0.12
LIMS2-208ENST00000410011 RAB36O95755 333 aa15.79■□□□□ 0.12
LIMS2-208ENST00000410011 CYP17A1P05093 508 aa15.79■□□□□ 0.12
LIMS2-208ENST00000410011 C6P13671 934 aa15.79■□□□□ 0.12
LIMS2-208ENST00000410011 DDOSTP39656 456 aa15.79■□□□□ 0.12
LIMS2-208ENST00000410011 RFX2P48378 723 aa15.79■□□□□ 0.12
LIMS2-208ENST00000410011 REEP5Q00765 189 aa15.79■□□□□ 0.12
LIMS2-208ENST00000410011 TMEM52BQ4KMG9 183 aa15.79■□□□□ 0.12
LIMS2-208ENST00000410011 RAB43Q86YS6 212 aa15.79■□□□□ 0.12
LIMS2-208ENST00000410011 RBM45Q8IUH3 476 aaKnown RBP15.79■□□□□ 0.12
LIMS2-208ENST00000410011 RAB8BQ92930 207 aa15.79■□□□□ 0.12
LIMS2-208ENST00000410011 KIAA1143Q96AT1 154 aaPredicted RBP15.79■□□□□ 0.12
LIMS2-208ENST00000410011 TRMT61AQ96FX7 289 aaKnown RBP15.79■□□□□ 0.12
LIMS2-208ENST00000410011 IL17FQ96PD4 163 aa15.79■□□□□ 0.12
LIMS2-208ENST00000410011 F2RL3Q96RI0 385 aa15.79■□□□□ 0.12
LIMS2-208ENST00000410011 SPATA5L1Q9BVQ7 753 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms