RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 MEP1AQ16819 746 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 ODF2Q5BJF6 829 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 FAM78AQ5JUQ0 283 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 MPP7Q5T2T1 576 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 MZT2BQ6NZ67 158 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 RFWD3Q6PCD5 774 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 CCDC137Q6PK04 289 aaKnown RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 PACS1Q6VY07 963 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 GET4Q7L5D6 327 aaPredicted RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 UMODL1-AS1Q8N2C9 162 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 RBM15BQ8NDT2 890 aaKnown RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 OR52K2Q8NGK3 314 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 C1orf54Q8WWF1 131 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 ING5Q8WYH8 240 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 SMARCD2Q92925 531 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 HDAC11Q96DB2 347 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 FAM120BQ96EK7 910 aaKnown RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 ST6GAL2Q96JF0 529 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 ZNF583Q96ND8 569 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 NECTIN4Q96NY8 510 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 LRRC3BQ96PB8 259 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 MYADMQ96S97 322 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 KRT12Q99456 494 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 CDX2Q99626 313 aaPredicted RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 DDX50Q9BQ39 737 aaKnown RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 MAK16Q9BXY0 300 aaKnown RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 ZYG11BQ9C0D3 744 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 NACA2Q9H009 215 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 GHITMQ9H3K2 345 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 RAD21L1Q9H4I0 556 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 POMKQ9H5K3 350 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 HOMER3Q9NSC5 361 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 GDE1Q9NZC3 331 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 AMACRQ9UHK6 382 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 SLC12A6Q9UHW9 1150 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 LSM7Q9UK45 103 aaKnown RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 DNPEPQ9ULA0 475 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 CDH7Q9ULB5 785 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 ZNF510Q9Y2H8 683 aa3.97□□□□□ -1.77
CLK1-203ENST00000409769 ZFP37Q9Y6Q3 630 aaPredicted RBP3.97□□□□□ -1.77
CLK1-203ENST00000409769 MYLKQ15746 1914 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 BCLAF3A2AJT9 711 aaKnown RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 A6NCN8 305 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 ANTXRLA6NF34 631 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 HEPACAM2A8MVW5 462 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 HACD1B0YJ81 288 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 ANHXE9PGG2 379 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 AP3D1O14617 1153 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 TRDMT1O14717 391 aaKnown RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 MCF2LO15068 1137 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 NDUFS4O43181 175 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 MBTPS2O43462 519 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 CLDN11O75508 207 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 SLC22A3O75751 556 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 LUC7L3O95232 432 aaKnown RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 TFAP2AP05549 437 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 IVDP26440 423 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 SERPINB6P35237 376 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 MTHFRP42898 656 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 KCNJ1P48048 391 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 DVL1P1P54792 670 aaPredicted RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 YBEYP58557 167 aaPredicted RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 EIF3EP60228 445 aaKnown RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 RPS24P62847 133 aaKnown RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 TUBB4BP68371 445 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 SNX1Q13596 522 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 PARP15Q460N3 678 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 RABGAP1LQ5R372 815 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 RWDD4Q6NW29 188 aaKnown RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 TMCO3Q6UWJ1 677 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 VITQ6UXI7 678 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 LRRC31Q6UY01 552 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 Q7L0L9 218 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 BZW1Q7L1Q6 419 aaKnown RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 PIWIL4Q7Z3Z4 852 aaKnown RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 SETD3Q86TU7 594 aaPredicted RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 GALNT13Q8IUC8 556 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 LRRC49Q8IUZ0 686 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 KLHL7Q8IXQ5 586 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 LGI2Q8N0V4 545 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 GBGT1Q8N5D6 347 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 ALLCQ8N6M5 410 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 TDRD5Q8NAT2 981 aaKnown RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 WFDC5Q8TCV5 224 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 P3H4Q92791 437 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 MAGOHBQ96A72 148 aaKnown RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 HAUS1Q96CS2 278 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 OTUB2Q96DC9 234 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 ALG14Q96F25 216 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 RUNDC3BQ96NL0 473 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 RPRD1AQ96P16 312 aaPredicted RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 TSGA13Q96PP4 275 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 QKIQ96PU8 341 aaKnown RBP eCLIP3.96□□□□□ -1.78
CLK1-203ENST00000409769 SMC6Q96SB8 1091 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 SLX1AQ9BQ83 275 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 TMEM121Q9BTD3 319 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 SLC39A8Q9C0K1 460 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 UBE2ZQ9H832 354 aaPredicted RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 C10orf88Q9H8K7 445 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms