RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 SLC6A18Q96N87 628 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 IL17FQ96PD4 163 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 OR2B2Q9GZK3 357 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 PCBD2Q9H0N5 130 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 NT5DC2Q9H857 520 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 WASH6PQ9NQA3 447 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 PAK6Q9NQU5 681 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 ZSCAN32Q9NX65 697 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 P2RX2Q9UBL9 471 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 ADAM29Q9UKF5 820 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 TBX21Q9UL17 535 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 DIMT1Q9UNQ2 313 aaKnown RBP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 WNT6Q9Y6F9 365 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 V9GYH0 126 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 CCDC88CQ9P219 2028 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 LTBP2Q14767 1821 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 HEPACAM2A8MVW5 462 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 K7ESM1 405 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 EFCAB14O75071 495 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 NME6O75414 186 aaPredicted RBP10.17□□□□□ -0.78
CLIP4-204ENST00000404424 LGI1O95970 557 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 CISD3P0C7P0 127 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 CCT3P49368 545 aaKnown RBP10.17□□□□□ -0.78
CLIP4-204ENST00000404424 DGKEP52429 567 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 HSPB3Q12988 150 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 GPR50Q13585 617 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 SF3B4Q15427 424 aaKnown RBP eCLIP10.17□□□□□ -0.78
CLIP4-204ENST00000404424 ARMC4Q5T2S8 1044 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 FAM180BQ6P0A1 224 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 RTL10Q7L3V2 364 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 NUDT13Q86X67 352 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 MMAAQ8IVH4 418 aaKnown RBP10.17□□□□□ -0.78
CLIP4-204ENST00000404424 CLDN22Q8N7P3 220 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 ZNF366Q8N895 744 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 VANGL1Q8TAA9 524 aaPredicted RBP10.17□□□□□ -0.78
CLIP4-204ENST00000404424 GPR151Q8TDV0 419 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 CAPSLQ8WWF8 208 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 RAB8BQ92930 207 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 DEFB118Q96PH6 123 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 A4GNTQ9UNA3 340 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 KLHL20Q9Y2M5 609 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 CMAHPQ9Y471 501 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 IRGMA1A4Y4 181 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 SLC28A2O43868 658 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 LZTS3O60299 673 aaPredicted RBP10.17□□□□□ -0.78
CLIP4-204ENST00000404424 RAB36O95755 333 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 TP53P04637 393 aaPredicted RBP10.17□□□□□ -0.78
CLIP4-204ENST00000404424 RPN2P04844 631 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 RHOP08100 348 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 IGFBP1P08833 259 aaPredicted RBP10.17□□□□□ -0.78
CLIP4-204ENST00000404424 ACADMP11310 421 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 C6P13671 934 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 PPP2R1BP30154 601 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 WEE1P30291 646 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 BMPR1AP36894 532 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 TRA2BP62995 288 aaKnown RBP10.17□□□□□ -0.78
CLIP4-204ENST00000404424 IFITM2Q01629 132 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 BNC1Q01954 994 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 KLHL22Q53GT1 634 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 ZNF517Q6ZMY9 492 aaPredicted RBP10.17□□□□□ -0.78
CLIP4-204ENST00000404424 SPATC1Q76KD6 591 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 NRARPQ7Z6K4 114 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 C11orf96Q7Z7L8 435 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 RAB43Q86YS6 212 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 TBC1D19Q8N5T2 526 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 ANKRD53Q8N9V6 530 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 FAM181AQ8N9Y4 354 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 OR4D11Q8NGI4 311 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 OR5AR1Q8NGP9 310 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 OR6F1Q8NGZ6 308 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 SLC25A46Q96AG3 418 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 CAPNS2Q96L46 248 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 SNX18Q96RF0 628 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 F2RL3Q96RI0 385 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 TREX2Q9BQ50 279 aaPredicted RBP10.17□□□□□ -0.78
CLIP4-204ENST00000404424 SPATA5L1Q9BVQ7 753 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 ACAT2Q9BWD1 397 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 RSPO3Q9BXY4 272 aaPredicted RBP10.17□□□□□ -0.78
CLIP4-204ENST00000404424 SRRQ9GZT4 340 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 SNTG1Q9NSN8 517 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 TAS2R7Q9NYW3 318 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 TVP23BQ9NYZ1 205 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 MUTYHQ9UIF7 546 aa10.17□□□□□ -0.78
CLIP4-204ENST00000404424 TTC36A6NLP5 189 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 A8MU76 341 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 FAM47E-STBD1D6RA91 191 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 RTCAO00442 366 aaKnown RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 STK25O00506 426 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 KIAA0355O15063 1070 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 TLX2O43763 284 aaPredicted RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 B4GALT2O60909 372 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 CYP17A1P05093 508 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 TRAPPC2P0DI81 140 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 TRAPPC2BP0DI82 140 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 CPEP16870 476 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 TNNI3P19429 210 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 NR4A2P43354 598 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 RPS5P46782 204 aaKnown RBP10.16□□□□□ -0.78
CLIP4-204ENST00000404424 CCR8P51685 355 aa10.16□□□□□ -0.78
CLIP4-204ENST00000404424 REEP5Q00765 189 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms