RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ZNF765Q7L2R6 523 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 BCDIN3DQ7Z5W3 292 aaKnown RBP24.24■■□□□ 1.47
COL13A1-203ENST00000398969 TRIM69Q86WT6 500 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 ANKRD53Q8N9V6 530 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 OR8J1Q8NGP2 316 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 TRMT61AQ96FX7 289 aaKnown RBP24.24■■□□□ 1.47
COL13A1-203ENST00000398969 AGAP4Q96P64 663 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 OR2A14Q96R47 310 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 FUZQ9BT04 418 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 MS4A8Q9BY19 250 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 SEMA3GQ9NS98 782 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 KLHL3Q9UH77 587 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 ANHXE9PGG2 379 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 CISD3P0C7P0 127 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 C6P13671 934 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 PSMA1P25786 263 aaKnown RBP24.24■■□□□ 1.47
COL13A1-203ENST00000398969 NR4A2P43354 598 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 PCBP4P57723 403 aaKnown RBP24.24■■□□□ 1.47
COL13A1-203ENST00000398969 CNTN1Q12860 1018 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 SPDYE7PQ495Y7 208 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 CCDC92Q53HC0 331 aaPredicted RBP24.24■■□□□ 1.47
COL13A1-203ENST00000398969 ZNF362Q5T0B9 420 aaPredicted RBP24.24■■□□□ 1.47
COL13A1-203ENST00000398969 MFSD4BQ5TF39 518 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 C11orf96Q7Z7L8 435 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 NATD1Q8N6N6 113 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 NANOGP1Q8N7R0 232 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 TCEANCQ8N8B7 351 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 ZNF513Q8N8E2 541 aaPredicted RBP24.24■■□□□ 1.47
COL13A1-203ENST00000398969 NRTNQ99748 197 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 TSSK6Q9BXA6 273 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 ACAD8Q9UKU7 415 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 GPR34Q9UPC5 381 aa24.24■■□□□ 1.47
COL13A1-203ENST00000398969 PCYT1BQ9Y5K3 369 aaPredicted RBP24.24■■□□□ 1.47
COL13A1-203ENST00000398969 RGS5O15539 181 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 HBQ1P09105 142 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 KELP23276 732 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 HEPACAMQ14CZ8 416 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 OR8H2Q8N162 312 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 SMPDL3AQ92484 453 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 ARRDC3Q96B67 414 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 TEFMQ96QE5 360 aaKnown RBP24.23■■□□□ 1.47
COL13A1-203ENST00000398969 NDUFB11Q9NX14 153 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 TAC3Q9UHF0 121 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 STUB1Q9UNE7 303 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 WBP11Q9Y2W2 641 aaKnown RBP24.23■■□□□ 1.47
COL13A1-203ENST00000398969 NUP210Q8TEM1 1887 aaPredicted RBP24.23■■□□□ 1.47
COL13A1-203ENST00000398969 HEPACAM2A8MVW5 462 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 CAPN5O15484 640 aaPredicted RBP24.23■■□□□ 1.47
COL13A1-203ENST00000398969 PRNPP04156 253 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 ST8SIA6P61647 398 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 C17orf64Q86WR6 236 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 CELF5Q8N6W0 485 aaKnown RBP24.23■■□□□ 1.47
COL13A1-203ENST00000398969 SLC7A13Q8TCU3 470 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 GPR151Q8TDV0 419 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 ASB15Q8WXK1 588 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 OTUB2Q96DC9 234 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 MOV10Q9HCE1 1003 aaKnown RBP24.23■■□□□ 1.47
COL13A1-203ENST00000398969 PRKAB1Q9Y478 270 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 V9GYH0 126 aa24.23■■□□□ 1.47
COL13A1-203ENST00000398969 NINQ8N4C6 2090 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 GRXCR1A8MXD5 290 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 ZNF670-ZNF695F2Z2N8 137 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 TP53P04637 393 aaPredicted RBP24.22■■□□□ 1.47
COL13A1-203ENST00000398969 FRKP42685 505 aaPredicted RBP24.22■■□□□ 1.47
COL13A1-203ENST00000398969 TARDBPQ13148 414 aaKnown RBP eCLIP24.22■■□□□ 1.47
COL13A1-203ENST00000398969 SF3B4Q15427 424 aaKnown RBP eCLIP24.22■■□□□ 1.47
COL13A1-203ENST00000398969 OCLNQ16625 522 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 RNLSQ5VYX0 342 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 PDZD3Q86UT5 571 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 EXOSC8Q96B26 276 aaKnown RBP24.22■■□□□ 1.47
COL13A1-203ENST00000398969 TMCO6Q96DC7 493 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 POLR2J2Q9GZM3 115 aaKnown RBP24.22■■□□□ 1.47
COL13A1-203ENST00000398969 MCOLN1Q9GZU1 580 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 SERHL2Q9H4I8 314 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 SEC14L3Q9UDX4 400 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 CACNB4O00305 520 aaPredicted RBP24.22■■□□□ 1.47
COL13A1-203ENST00000398969 WWP2O00308 870 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 RORCP51449 518 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 PROKR2Q8NFJ6 384 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 ZNF707Q96C28 371 aaPredicted RBP24.22■■□□□ 1.47
COL13A1-203ENST00000398969 ZNF486Q96H40 463 aaPredicted RBP24.22■■□□□ 1.47
COL13A1-203ENST00000398969 ZNF607Q96SK3 696 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 SNTG1Q9NSN8 517 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 CUEDC1Q9NWM3 386 aaPredicted RBP24.22■■□□□ 1.47
COL13A1-203ENST00000398969 CHD9Q3L8U1 2897 aa24.22■■□□□ 1.47
COL13A1-203ENST00000398969 HYKKA2RU49 373 aa24.21■■□□□ 1.47
COL13A1-203ENST00000398969 LZTS3O60299 673 aaPredicted RBP24.21■■□□□ 1.47
COL13A1-203ENST00000398969 TPST2O60704 377 aa24.21■■□□□ 1.47
COL13A1-203ENST00000398969 CCNKO75909 580 aa24.21■■□□□ 1.47
COL13A1-203ENST00000398969 ITGB7P26010 798 aa24.21■■□□□ 1.47
COL13A1-203ENST00000398969 RCVRNP35243 200 aa24.21■■□□□ 1.47
COL13A1-203ENST00000398969 OR2B6P58173 313 aa24.21■■□□□ 1.47
COL13A1-203ENST00000398969 DPTQ07507 201 aa24.21■■□□□ 1.47
COL13A1-203ENST00000398969 DHCR24Q15392 516 aa24.21■■□□□ 1.47
COL13A1-203ENST00000398969 PAQR6Q6TCH4 344 aa24.21■■□□□ 1.47
COL13A1-203ENST00000398969 C12orf40Q86WS4 652 aa24.21■■□□□ 1.47
COL13A1-203ENST00000398969 DCUN1D3Q8IWE4 304 aa24.21■■□□□ 1.47
COL13A1-203ENST00000398969 IL17RCQ8NAC3 791 aa24.21■■□□□ 1.47
COL13A1-203ENST00000398969 SETD6Q8TBK2 473 aa24.21■■□□□ 1.47
COL13A1-203ENST00000398969 RASSF5Q8WWW0 418 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms