RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 HOXA9P31269 272 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 FGF9P31371 208 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 TIA1P31483 386 aaKnown RBP eCLIP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 PPM1AP35813 382 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 HSD17B2P37059 387 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 AGTR2P50052 363 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 RAB5BP61020 215 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 GPR68Q15743 365 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CDKN3Q16667 212 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CRB2Q5IJ48 1285 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 B3GNT8Q7Z7M8 397 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 KLHL6Q8WZ60 621 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ST8SIA2Q92186 375 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 PMM1Q92871 262 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 MARVELD3Q96A59 401 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CREB3L1Q96BA8 519 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 NXPE2Q96DL1 559 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 SYT17Q9BSW7 474 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 NIPAL2Q9H841 368 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 MGAT4BQ9UQ53 548 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ASB1Q9Y576 335 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 DSPPQ9NZW4 1301 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 LOC100509620A0A075B734 347 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 TSPAN11A1L157 253 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 SMAD6O43541 496 aaKnown RBP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CELF2O95319 508 aaKnown RBP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 GALTP07902 379 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 GSTM3P21266 225 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 S100A2P29034 98 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CORO1AP31146 461 aaKnown RBP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 SELENOWP63302 87 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CHIT1Q13231 466 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ILKQ13418 452 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 SNTA1Q13424 505 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ARHGAP19Q14CB8 494 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 MTSS1LQ765P7 747 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 NRARPQ7Z6K4 114 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF280BQ86YH2 543 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 GDPD1Q8N9F7 314 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 AQP11Q8NBQ7 271 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ADAM29Q9UKF5 820 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 IFI6P09912 130 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ACADMP11310 421 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CXCR2P25025 360 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 POLR2IP36954 125 aaKnown RBP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 C2orf80Q0P641 193 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 FGL2Q14314 439 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CDK10Q15131 360 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 GRHL2Q6ISB3 625 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF782Q6ZMW2 699 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 HTR3DQ70Z44 454 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 OR5AK3PQ8NH89 298 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 MOSPD2Q8NHP6 518 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 GPR151Q8TDV0 419 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CAMK1GQ96NX5 476 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 MGLLQ99685 303 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 SPATA5L1Q9BVQ7 753 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 TSSK6Q9BXA6 273 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ANKRD19PQ9H560 264 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 EVA1AQ9H8M9 152 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 COPZ2Q9P299 210 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ASF1AQ9Y294 204 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 PCDHGA2Q9Y5H1 932 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 A0A1W2PQ09 198 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 AKAP8O43823 692 aaKnown RBP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 PEX14O75381 377 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 TPPPO94811 219 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CYP2A6P11509 494 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF14P17017 642 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 AMD1P17707 334 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 BMP7P18075 431 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CBLP22681 906 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 TACR1P25103 407 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 WEE1P30291 646 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 MNDAP41218 407 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 PPP3R1P63098 170 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 SETD7Q8WTS6 366 aaKnown RBP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 BTBD2Q9BX70 525 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 MYNNQ9NPC7 610 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 SLC25A13Q9UJS0 675 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 YIPF1Q9Y548 306 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ALG5Q9Y673 324 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 DAPL1A0PJW8 107 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 KPNA3O00505 521 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 TLX2O43763 284 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 REM1O75628 298 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 RFPL3O75679 317 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 PPM1BO75688 479 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 TBX18O95935 607 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 PVALBP20472 110 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-205ENST00000397611 OR3A3P47888 321 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 MVDP53602 400 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF763Q0D2J5 394 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 DUSP6Q16828 381 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 CLVS2Q5SYC1 327 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 LAS2Q8IYD9 372 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 FAM86B1Q8N7N1 296 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 SLC35B4Q969S0 331 aa5.2□□□□□ -1.58
PTPRD-205ENST00000397611 PKP4Q99569 1192 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms