RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 PSMA4P25789 261 aaKnown RBP16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 CCL11P51671 97 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 RPS13P62277 151 aaKnown RBP16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 KLC1Q07866 573 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 BLMHQ13867 455 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 SF1Q15637 639 aaKnown RBP16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 FAM69BQ5VUD6 431 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 FAM198BQ6UWH4 519 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 CAMKMTQ7Z624 323 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 GPR180Q86V85 440 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 ADGRF3Q8IZF5 1079 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 C1orf52Q8N6N3 182 aaKnown RBP16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 ANKFN1Q8N957 763 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 ICA1LQ8NDH6 482 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 OR2L3Q8NG85 312 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 OR8J2Q8NGG1 315 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 NR1H4Q96RI1 486 aaPredicted RBP16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 NRTNQ99748 197 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 AHSPQ9NZD4 102 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 TCFL5Q9UL49 500 aa16.47■□□□□ 0.23
TNFSF13-205ENST00000396545 PCM1Q15154 2024 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 TMEM150CB9EJG8 249 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 BTN3A3O00478 584 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 SEMA3DO95025 777 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 ST6GAL1P15907 406 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 GGT1P19440 569 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 TIA1P31483 386 aaKnown RBP eCLIP16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 KIR3DL1P43629 444 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 ASMTP46597 345 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 CSNK1G2P78368 415 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 PLIN5Q00G26 463 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 RELAQ04206 551 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 NADK2Q4G0N4 442 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 GALNT11Q8NCW6 608 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 CPT1CQ8TCG5 803 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 SPNS1Q9H2V7 528 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 RPF2Q9H7B2 306 aaKnown RBP16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 PCDHB14Q9Y5E9 798 aa16.46■□□□□ 0.23
TNFSF13-205ENST00000396545 BLACEA4D250 179 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 ISM1B1AKI9 464 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 H0YJX3 145 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 H7BY64 318 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 SCN2BO60939 215 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 BMP2P12643 396 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 NCK1P16333 377 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 IL10P22301 178 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 TRPC1P48995 793 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 WNT3P56703 355 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 RBBP5Q15291 538 aaKnown RBP16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 PGS1Q32NB8 556 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 GTDC1Q4AE62 458 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 MTX3Q5HYI7 312 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 TBCELQ5QJ74 424 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 GLYATQ6IB77 296 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 CALHM3Q86XJ0 350 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 TMEM132CQ8N3T6 1108 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 DTWD1Q8N5C7 304 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 TRPV3Q8NET8 790 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 TNIP2Q8NFZ5 429 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 OR52E4Q8NGH9 312 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 N4BP2L2Q92802 583 aaPredicted RBP16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 CLIP3Q96DZ5 547 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 PRAP1Q96NZ9 151 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 CENPKQ9BS16 269 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 IKZF5Q9H5V7 419 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 SLC6A13Q9NSD5 602 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 FAM120CQ9NX05 1096 aaKnown RBP16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 VPS4AQ9UN37 437 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 PCDHGB7Q9Y5F8 929 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 KLK4Q9Y5K2 254 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 SHANK1Q9Y566 2161 aa16.45■□□□□ 0.22
TNFSF13-205ENST00000396545 C2orf74A8MZ97 194 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 FAM220BPB1ANY3 271 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 SCAMP2O15127 329 aaKnown RBP16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 CLEC3AO75596 197 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 TIPRLO75663 272 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 LRATO95237 230 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 ZNF26P17031 533 aaPredicted RBP16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 PSMB5P28074 263 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 AHRP35869 848 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 GZMMP51124 257 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 ARFIP1P53367 373 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 ITGA1P56199 1179 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 MRPS35P82673 323 aaKnown RBP16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 CYP51A1Q16850 503 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 OR4F3Q6IEY1 312 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 OR2T12Q8NG77 320 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 OR7A2PQ8NGA2 310 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 FAM110BQ8TC76 370 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 NSMCE2Q96MF7 247 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 TRAPPC9Q96Q05 1148 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 INPP5KQ9BT40 448 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 REXO4Q9GZR2 422 aaKnown RBP16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 KAT8Q9H7Z6 458 aaKnown RBP16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 GORASP2Q9H8Y8 452 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 PRM3Q9NNZ6 103 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 AGPAT4Q9NRZ5 378 aa16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 CUEDC1Q9NWM3 386 aaPredicted RBP16.44■□□□□ 0.22
TNFSF13-205ENST00000396545 WBP11Q9Y2W2 641 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms