RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 IFNW1P05000 195 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 CHRM5P08912 532 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-204ENST00000395756 HTR1BP28222 390 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 P3H2Q8IVL5 708 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 KAT2AQ92830 837 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 AMDHD1Q96NU7 426 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 CSF3RQ99062 836 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 EPYCQ99645 322 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 PRR14Q9BWN1 585 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 GABARAPL1Q9H0R8 117 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 MVB12BQ9H7P6 319 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 SCN3BQ9NY72 215 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 SEC14L3Q9UDX4 400 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 NDRG4Q9ULP0 352 aaKnown RBP16.93■□□□□ 0.3
SREBF1-204ENST00000395756 NOX1Q9Y5S8 564 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 KIAA1549LQ6ZVL6 1849 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 DNAJB6O75190 326 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 GSTM2P28161 218 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 CMPK1P30085 196 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 KRT20P35900 424 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 EIF2B2P49770 351 aaKnown RBP16.93■□□□□ 0.3
SREBF1-204ENST00000395756 ENTPD1P49961 510 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 LIM2P55344 173 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 C1orf61Q13536 156 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 MAD2L1BPQ15013 274 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-204ENST00000395756 PRRT3Q5FWE3 981 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 ZC3H12BQ5HYM0 836 aaKnown RBP16.93■□□□□ 0.3
SREBF1-204ENST00000395756 SAXO2Q658L1 398 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 FAHD1Q6P587 224 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 ABHD17CQ6PCB6 329 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 ENTHD1Q8IYW4 607 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 DEFB119Q8N690 84 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 GEMIN6Q8WXD5 167 aaKnown RBP16.93■□□□□ 0.3
SREBF1-204ENST00000395756 POP5Q969H6 163 aaKnown RBP16.93■□□□□ 0.3
SREBF1-204ENST00000395756 FUNDC2Q9BWH2 189 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 ACER3Q9NUN7 267 aa16.93■□□□□ 0.3
SREBF1-204ENST00000395756 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.93■□□□□ 0.33e-7■■□□□ 11.7
SREBF1-204ENST00000395756 PRAMEF27A3QJZ7 478 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 CPNE6O95741 557 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 PVRP15151 417 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 DCKP27707 260 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 MVKQ03426 396 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 CRB2Q5IJ48 1285 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 Q6ZS52 159 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 MEX3DQ86XN8 651 aaKnown RBP16.92■□□□□ 0.3
SREBF1-204ENST00000395756 ARMC8Q8IUR7 673 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 AQP11Q8NBQ7 271 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 PROX1Q92786 737 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 CNRIP1Q96F85 164 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-204ENST00000395756 ZNF556Q9HAH1 456 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 PRDM7Q9NQW5 492 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 PCDHGA6Q9Y5G7 932 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 SOX14O95416 240 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 AIFM1O95831 613 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 MT-ND2P03891 347 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 IGFBP1P08833 259 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-204ENST00000395756 HOXB6P17509 224 aaKnown RBP16.92■□□□□ 0.3
SREBF1-204ENST00000395756 ATP5A1P25705 553 aaKnown RBP16.92■□□□□ 0.3
SREBF1-204ENST00000395756 C21orf33P30042 268 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-204ENST00000395756 ID2Q02363 134 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 MICAQ29983 383 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 Q6ZSR6 202 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 C11orf74Q86VG3 221 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 TRIM48Q8IWZ4 208 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 GPR32P1Q8NGA4 272 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 RLN3Q8WXF3 142 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 WDR92Q96MX6 357 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 ALPK1Q96QP1 1244 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 PIP5K1AQ99755 562 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 MAPKAP1Q9BPZ7 522 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 TREX2Q9BQ50 279 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-204ENST00000395756 C6orf106Q9H6K1 298 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-204ENST00000395756 NEUROD4Q9HD90 331 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 TBCCD1Q9NVR7 557 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-204ENST00000395756 A0A0C4DFX4 3053 aa16.92■□□□□ 0.3
SREBF1-204ENST00000395756 M0R3H8 397 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 GASTP01350 101 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 CCNA2P20248 432 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 PCBP3P57721 371 aaKnown RBP16.91■□□□□ 0.3
SREBF1-204ENST00000395756 PIN1Q13526 163 aaPredicted RBP16.91■□□□□ 0.3
SREBF1-204ENST00000395756 LTB4RQ15722 352 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 DEFB134Q4QY38 66 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 LACC1Q8IV20 430 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 DNASE1L2Q92874 299 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 FAIM2Q9BWQ8 316 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 RNF6Q9Y252 685 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 KCNE3Q9Y6H6 103 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 TRBV4-1A0A0J9YWV2 114 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 OR6C74A6NCV1 312 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 C2CD4DB7Z1M9 353 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 FFAR1O14842 300 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 SEC14L2O76054 403 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 HMGN2P05204 90 aaKnown RBP16.91■□□□□ 0.3
SREBF1-204ENST00000395756 CELA2BP08218 269 aaPredicted RBP16.91■□□□□ 0.3
SREBF1-204ENST00000395756 CD300CQ08708 224 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 Q6ZNX1 250 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 TSPYL5Q86VY4 417 aaPredicted RBP16.91■□□□□ 0.3
SREBF1-204ENST00000395756 SCAIQ8N9R8 606 aa16.91■□□□□ 0.3
SREBF1-204ENST00000395756 OR4D11Q8NGI4 311 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms