RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 OR52N2Q8NGI0 321 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 SLC7A13Q8TCU3 470 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 REEP4Q9H6H4 257 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 EGLN3Q9H6Z9 239 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 NDUFB11Q9NX14 153 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 VWA8A3KMH1 1905 aa13.6□□□□□ -0.23
CLIP2-203ENST00000395060 LYRM1O43325 122 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 MYL12AP19105 171 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 CELP19835 753 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 ERP29P30040 261 aaKnown RBP13.59□□□□□ -0.23
CLIP2-203ENST00000395060 DSTNP60981 165 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 RHAGQ02094 409 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 LMAN2Q12907 356 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 NCF4Q15080 339 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 POU4F3Q15319 338 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 Q6ZVU0 165 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 DEFB128Q7Z7B8 93 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 PEX5LQ8IYB4 626 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 CMTM8Q8IZV2 173 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 OR5D16Q8NGK9 328 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 POP5Q969H6 163 aaKnown RBP13.59□□□□□ -0.23
CLIP2-203ENST00000395060 TMEM19Q96HH6 336 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 MED30Q96HR3 178 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 QRFPRQ96P65 431 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 IL17FQ96PD4 163 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 SLC6A16Q9GZN6 736 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 CXorf36Q9H7Y0 433 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 ING3Q9NXR8 418 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 BTNL2Q9UIR0 455 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 ANGPT4Q9Y264 503 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 SH3D21A4FU49 640 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 FABP7O15540 132 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 LZTS3O60299 673 aaPredicted RBP13.59□□□□□ -0.23
CLIP2-203ENST00000395060 IGSF6O95976 241 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 OR12D1P0DN82 309 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 RHCEP18577 417 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 ASMTP46597 345 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 MAPK12P53778 367 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 ZNF791Q3KP31 576 aaPredicted RBP13.59□□□□□ -0.23
CLIP2-203ENST00000395060 BCL2L15Q5TBC7 163 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 KIAA1161Q6NSJ0 714 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 MSANTD1Q6ZTZ1 278 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 CHST9Q7L1S5 443 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 TMCO2Q7Z6W1 182 aaPredicted RBP13.59□□□□□ -0.23
CLIP2-203ENST00000395060 IQCHQ86VS3 1027 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 XAGE5Q8WWM1 108 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 TMEM159Q96B96 161 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 TBX5Q99593 518 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 QRSL1Q9H0R6 528 aaKnown RBP13.59□□□□□ -0.23
CLIP2-203ENST00000395060 SLC25A19Q9HC21 320 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 EVA1BQ9NVM1 165 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 REV1Q9UBZ9 1251 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 CORO2BQ9UQ03 480 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 RPL36Q9Y3U8 105 aaKnown RBP13.59□□□□□ -0.23
CLIP2-203ENST00000395060 LOC105371267A0A1B0GV96 52 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 I3L521 148 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 TOXO94900 526 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 LALBAP00709 142 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 PPIBP23284 216 aaKnown RBP13.59□□□□□ -0.23
CLIP2-203ENST00000395060 ELAVL4P26378 380 aaKnown RBP13.59□□□□□ -0.23
CLIP2-203ENST00000395060 MLLT3P42568 568 aaPredicted RBP13.59□□□□□ -0.23
CLIP2-203ENST00000395060 POU6F2P78424 691 aaPredicted RBP13.59□□□□□ -0.23
CLIP2-203ENST00000395060 ZNF763Q0D2J5 394 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 ZNF267Q14586 743 aaPredicted RBP13.59□□□□□ -0.23
CLIP2-203ENST00000395060 LIPJQ5W064 366 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 LAMTOR1Q6IAA8 161 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 TCTN3Q6NUS6 607 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 CHCHD4Q8N4Q1 142 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 BEST4Q8NFU0 473 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 GPR32P1Q8NGA4 272 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 SLC38A5Q8WUX1 472 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 RASSF5Q8WWW0 418 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 UCN3Q969E3 161 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 NACC2Q96BF6 587 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 GPA33Q99795 319 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.59□□□□□ -0.23
CLIP2-203ENST00000395060 TRPC4Q9UBN4 977 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 MAPRE3Q9UPY8 281 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 MYOFQ9NZM1 2061 aa13.59□□□□□ -0.23
CLIP2-203ENST00000395060 PAHP00439 452 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 CKMP06732 381 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 ARSBP15848 533 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 HMGA1P17096 107 aaKnown RBP13.58□□□□□ -0.24
CLIP2-203ENST00000395060 NAT1P18440 290 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 ATP6V1E1P36543 226 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 SLC9A3P48764 834 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 TCTN1Q2MV58 587 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 TOR1AIP1Q5JTV8 583 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 TPRG1Q6ZUI0 275 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 COMTD1Q86VU5 262 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 OR4F15Q8NGB8 312 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 EXOSC8Q96B26 276 aaKnown RBP13.58□□□□□ -0.24
CLIP2-203ENST00000395060 ARMC5Q96C12 935 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 RC3H2Q9HBD1 1191 aaKnown RBP13.58□□□□□ -0.24
CLIP2-203ENST00000395060 ATP6V1HQ9UI12 483 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 OR51B4Q9Y5P0 310 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 MYO7AQ13402 2215 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 SHISA3A0PJX4 238 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 PRMT3O60678 531 aa13.58□□□□□ -0.24
CLIP2-203ENST00000395060 PQBP1O60828 265 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms