RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 CABIN1Q9Y6J0 2220 aa18.51■□□□□ 0.55
RAB5C-202ENST00000393860 CPED1A4D0V7 1026 aa18.51■□□□□ 0.55
RAB5C-202ENST00000393860 EI24O14681 340 aa18.51■□□□□ 0.55
RAB5C-202ENST00000393860 SRPX2O60687 465 aaPredicted RBP18.51■□□□□ 0.55
RAB5C-202ENST00000393860 TNFRSF1BP20333 461 aa18.51■□□□□ 0.55
RAB5C-202ENST00000393860 MAT1AQ00266 395 aaKnown RBP18.51■□□□□ 0.55
RAB5C-202ENST00000393860 CEBPEQ15744 281 aa18.51■□□□□ 0.55
RAB5C-202ENST00000393860 ZNF630Q2M218 657 aaPredicted RBP18.51■□□□□ 0.55
RAB5C-202ENST00000393860 CYP27C1Q4G0S4 372 aa18.51■□□□□ 0.55
RAB5C-202ENST00000393860 TBPL2Q6SJ96 375 aa18.51■□□□□ 0.55
RAB5C-202ENST00000393860 OLIG3Q7RTU3 272 aa18.51■□□□□ 0.55
RAB5C-202ENST00000393860 LRRC25Q8N386 305 aaPredicted RBP18.51■□□□□ 0.55
RAB5C-202ENST00000393860 TBC1D20Q96BZ9 403 aa18.51■□□□□ 0.55
RAB5C-202ENST00000393860 C16orf58Q96GQ5 468 aa18.51■□□□□ 0.55
RAB5C-202ENST00000393860 C9orf16Q9BUW7 83 aa18.51■□□□□ 0.55
RAB5C-202ENST00000393860 ANGPT4Q9Y264 503 aa18.51■□□□□ 0.55
RAB5C-202ENST00000393860 AP4B1Q9Y6B7 739 aa18.51■□□□□ 0.55
RAB5C-202ENST00000393860 SPACA6W5XKT8 324 aa18.51■□□□□ 0.55
RAB5C-202ENST00000393860 SPTBP11277 2137 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 ARID1BQ8NFD5 2236 aaPredicted RBP18.5■□□□□ 0.55
RAB5C-202ENST00000393860 ASXL3Q9C0F0 2248 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 TMEM229AB2RXF0 380 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 AGRPO00253 132 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 CYR61O00622 381 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 GNGT2O14610 69 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 SUV39H1O43463 412 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 FGF17O60258 216 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 ZBTB11O95625 1053 aaPredicted RBP18.5■□□□□ 0.55
RAB5C-202ENST00000393860 MATN1P21941 496 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 CD1CP29017 333 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 LASP1Q14847 261 aaKnown RBP18.5■□□□□ 0.55
RAB5C-202ENST00000393860 SYT16Q17RD7 645 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 PPP4R4Q6NUP7 873 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 GUSBP11Q6P575 273 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 TTC29Q8NA56 475 aaPredicted RBP18.5■□□□□ 0.55
RAB5C-202ENST00000393860 SIMC1Q8NDZ2 872 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 SLC38A5Q8WUX1 472 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 TMEM19Q96HH6 336 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 NUDT22Q9BRQ3 303 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 ADPRHL2Q9NX46 363 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 DNAJB9Q9UBS3 223 aa18.5■□□□□ 0.55
RAB5C-202ENST00000393860 CNOT11Q9UKZ1 510 aaKnown RBP18.5■□□□□ 0.55
RAB5C-202ENST00000393860 HYKKA2RU49 373 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 M0QX08 132 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 CHST10O43529 356 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 FOXS1O43638 330 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 SIGLEC6O43699 453 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 SEMG1P04279 462 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 HMGN2P05204 90 aaKnown RBP18.49■□□□□ 0.55
RAB5C-202ENST00000393860 VLDLRP98155 873 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 OTUD3Q5T2D3 398 aaPredicted RBP18.49■□□□□ 0.55
RAB5C-202ENST00000393860 INTS11Q5TA45 600 aaKnown RBP18.49■□□□□ 0.55
RAB5C-202ENST00000393860 TMEM64Q6YI46 380 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 WDR53Q7Z5U6 358 aaPredicted RBP18.49■□□□□ 0.55
RAB5C-202ENST00000393860 SPRED1Q7Z699 444 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 HS3ST5Q8IZT8 346 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 SMYD1Q8NB12 490 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 SFXN5Q8TD22 340 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 XAGE5Q8WWM1 108 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 ELP4Q96EB1 424 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 BTBD9Q96Q07 612 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 CD180Q99467 661 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 SMOC1Q9H4F8 434 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 A4GALTQ9NPC4 353 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 ZSCAN32Q9NX65 697 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 FBXO4Q9UKT5 387 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 RAB23Q9ULC3 237 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 ATXN7L1Q9ULK2 861 aaPredicted RBP18.49■□□□□ 0.55
RAB5C-202ENST00000393860 VPS13AQ96RL7 3174 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 PRAMEF27A3QJZ7 478 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 C5orf58C9J3I9 102 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 GPR3P46089 330 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 ARL4DP49703 201 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 RAB38P57729 211 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 MAPK11Q15759 364 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 SYPL1Q16563 259 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.49■□□□□ 0.55
RAB5C-202ENST00000393860 PERM1Q5SV97 790 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 FAM111BQ6SJ93 734 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 PLXDC1Q8IUK5 500 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 NUP43Q8NFH3 380 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 OR7G2Q8NG99 324 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 RNF31Q96EP0 1072 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 ZC3H10Q96K80 434 aaKnown RBP18.49■□□□□ 0.55
RAB5C-202ENST00000393860 ZNF597Q96LX8 424 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 VNN3Q9NY84 501 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 U3KQV3 271 aa18.49■□□□□ 0.55
RAB5C-202ENST00000393860 LY6G6EA0A0G2JKS1 128 aa18.48■□□□□ 0.55
RAB5C-202ENST00000393860 EMC8O43402 210 aa18.48■□□□□ 0.55
RAB5C-202ENST00000393860 SLC28A2O43868 658 aa18.48■□□□□ 0.55
RAB5C-202ENST00000393860 FABP3P05413 133 aa18.48■□□□□ 0.55
RAB5C-202ENST00000393860 FHP07954 510 aa18.48■□□□□ 0.55
RAB5C-202ENST00000393860 UBTFL6P0CB48 400 aaPredicted RBP18.48■□□□□ 0.55
RAB5C-202ENST00000393860 CPMP14384 443 aa18.48■□□□□ 0.55
RAB5C-202ENST00000393860 KCNJ10P78508 379 aa18.48■□□□□ 0.55
RAB5C-202ENST00000393860 NR0B2Q15466 257 aa18.48■□□□□ 0.55
RAB5C-202ENST00000393860 NDUFA9Q16795 377 aa18.48■□□□□ 0.55
RAB5C-202ENST00000393860 PEAR1Q5VY43 1037 aaPredicted RBP18.48■□□□□ 0.55
RAB5C-202ENST00000393860 TMEM179BQ7Z7N9 219 aa18.48■□□□□ 0.55
RAB5C-202ENST00000393860 EID2Q8N6I1 236 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms