RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ERV3-1Q14264 604 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 GPR176Q14439 515 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CBX2Q14781 532 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 KYAT1Q16773 422 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 MINDY4Q4G0A6 757 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 MSANTD1Q6ZTZ1 278 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ANKRD46Q86W74 232 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF567Q8N184 647 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 INO80EQ8NBZ0 244 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ACBD4Q8NC06 268 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 OR14A16Q8NHC5 309 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 LPPQ93052 612 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 SLAMF9Q96A28 289 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 RHBDF1Q96CC6 855 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ZBED6CLQ96FA7 236 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 PIWIL1Q96J94 861 aaKnown RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CMTM3Q96MX0 182 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 MCCC1Q96RQ3 725 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 TMED9Q9BVK6 235 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF629Q9UEG4 869 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 TCRBV5S2A0A599 114 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 SLC9B1P1A6NJY1 282 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ADAM10O14672 748 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 OR10H3O60404 316 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ARIH2O95376 493 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CFDP00746 253 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 FBP1P09467 338 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 HOXD8P13378 290 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ITGB8P26012 769 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 FAUP35544 74 aaKnown RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CRATP43155 626 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 RBP2P50120 134 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 GNG10P50151 68 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 SLC16A1P53985 500 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CAV3P56539 151 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CTBP2P56545 445 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 KCNJ10P78508 379 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CDC42EP1Q00587 391 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ACY1Q03154 408 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 HTR4Q13639 388 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CCINQ13939 588 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 RNF151Q2KHN1 245 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 GOLGA7BQ2TAP0 167 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 C1orf220Q5T0J3 134 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 HECTD2Q5U5R9 776 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 RBMS3Q6XE24 437 aaKnown RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 B3GLCTQ6Y288 498 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 LINGO2Q7L985 606 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 TMEM200AQ86VY9 491 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CLDN22Q8N7P3 220 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 GLYATL2Q8WU03 294 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 RHOVQ96L33 236 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 C3orf30Q96M34 536 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 PANX1Q96RD7 426 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 MGME1Q9BQP7 344 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 EDEM2Q9BV94 578 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CDT1Q9H211 546 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 TMEM248Q9NWD8 314 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 VAPAQ9P0L0 249 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 SLC13A4Q9UKG4 626 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 LOC390937A0A1W2PQ73 354 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 MANSC4A6NHS7 340 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 GPR31O00270 319 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 TREHO43280 583 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CACNG3O60359 315 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 B3GAT3O94766 335 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ACAA1P09110 424 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ENGP17813 658 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CD68P34810 354 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 GJA5P36382 358 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ARF5P84085 180 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 GLO1Q04760 184 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 BCL2L1Q07817 233 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 PABPC1L2AQ5JQF8 200 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 PLAG1Q6DJT9 500 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CAPN13Q6MZZ7 669 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 MAMDC2Q7Z304 686 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 SKA3Q8IX90 412 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 HASPINQ8TF76 798 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 RNF139Q8WU17 664 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CNOT9Q92600 299 aaKnown RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 TMEM176AQ96HP8 235 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 PGLYRP2Q96PD5 576 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 OR2M4Q96R27 311 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 PRO1933Q9H354 126 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ACSL6Q9UKU0 697 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 TIMM13Q9Y5L4 95 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 DMRT1Q9Y5R6 373 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 LRP5O75197 1615 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 TNRC6CQ9HCJ0 1690 aaKnown RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 SLX4Q8IY92 1834 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 TMEM200CA6NKL6 621 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 WASH3PC4AMC7 463 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 LRRN3E7EW58 273 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 FZD6O60353 706 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CDC40O60508 579 aaKnown RBP eCLIP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 MOCS2O96007 188 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 CKBP12277 381 aa7.29□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF25P17030 456 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-201ENST00000393077 GABRB1P18505 474 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms