RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 MATN1P21941 496 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 DCTP40126 519 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 GABRA4P48169 554 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 ARRB1P49407 418 aaPredicted RBP10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 KHKP50053 298 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 ANXA11P50995 505 aaKnown RBP10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 IST1P53990 364 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 ITGA1P56199 1179 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 OLR1P78380 273 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 BNC1Q01954 994 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 MERTKQ12866 999 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 BNIP3Q12983 259 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 GPR19Q15760 415 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 OTUD3Q5T2D3 398 aaPredicted RBP10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 TMEM107Q6UX40 140 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 USP53Q70EK8 1073 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 STK32CQ86UX6 486 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 HIPK1Q86Z02 1210 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 CA13Q8N1Q1 262 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 OR9A2Q8NGT5 310 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 GAB3Q8WWW8 586 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 ELP4Q96EB1 424 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 ZDHHC12Q96GR4 267 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 ZNF285Q96NJ3 590 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 RDH12Q96NR8 316 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 OR51I1Q9H343 314 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 EPB41L1Q9H4G0 881 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 STARD5Q9NSY2 213 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 USE1Q9NZ43 259 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 CACNA1EQ15878 2313 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 PCDH15Q96QU1 1955 aa10.78□□□□□ -0.68
SMARCAL1-203ENST00000392128 ZNF860A6NHJ4 632 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 C5orf58C9J3I9 102 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 hCG_2039718K7EN88 272 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 CYR61O00622 381 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 OPN1SWP03999 348 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 BCHEP06276 602 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 XKP51811 444 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 GFERP55789 205 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 SIM1P81133 766 aaPredicted RBP10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 PPP2R2BQ00005 443 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 SHBQ15464 509 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 MAPK11Q15759 364 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 SLC36A3Q495N2 470 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 IFI44LQ53G44 452 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 NIPAL1Q6NVV3 410 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 TMEM154Q6P9G4 183 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 SHQ1Q6PI26 577 aaKnown RBP10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 SZRD1Q7Z422 152 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 CARFQ8N187 725 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 EDAQ92838 391 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 RAB8BQ92930 207 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 TMEM19Q96HH6 336 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 TGM7Q96PF1 710 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 RBM4BQ9BQ04 359 aaKnown RBP10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 RBM4Q9BWF3 364 aaKnown RBP10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 OSBPL10Q9BXB5 764 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 C3orf14Q9HBI5 128 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 ANKHQ9HCJ1 492 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 ETAA1Q9NY74 926 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 NTMQ9P121 344 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 IFT80Q9P2H3 777 aaPredicted RBP10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 P2RX2Q9UBL9 471 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 SUSD2Q9UGT4 822 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 PILRBQ9UKJ0 227 aa10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 MAGED1Q9Y5V3 778 aaPredicted RBP10.77□□□□□ -0.68
SMARCAL1-203ENST00000392128 TMEM247A6NEH6 219 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 EIF4E1BA6NMX2 242 aaKnown RBP10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 E2F6O75461 281 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 PDE9AO76083 593 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 CTSBP07858 339 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 ALPPL2P10696 532 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 GLB1P16278 677 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 MC3RP41968 323 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 GPR3P46089 330 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 NR1D2Q14995 579 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 TMEM179BQ7Z7N9 219 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 ARMC8Q8IUR7 673 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 SLC35F3Q8IY50 421 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 NRBF2Q96F24 287 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 GABARAPL1Q9H0R8 117 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 VNN3Q9NY84 501 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 PLCL2Q9UPR0 1127 aa10.77□□□□□ -0.69
SMARCAL1-203ENST00000392128 IGHV1OR21-1A0A087WYE8 117 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 IGHV5-51A0A0C4DH38 117 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 PGM3O95394 542 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 HMGN2P05204 90 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 OR12D1P0DN82 309 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 CPMP14384 443 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 ALDH4A1P30038 563 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 PTGER1P34995 402 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 MLLT3P42568 568 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 RAB38P57729 211 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 SKP1P63208 163 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 SRSF5Q13243 272 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 GK3PQ14409 553 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 NDUFA9Q16795 377 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 PLK5Q496M5 336 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 MAML2Q8IZL2 1156 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 DHRSXQ8N5I4 330 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms