RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 CDKL1Q00532 357 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 SLC29A2Q14542 456 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 SETDB1Q15047 1291 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 POU4F3Q15319 338 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 PAGE2BQ5JRK9 111 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 ANKRD26P1Q6NSI1 321 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 RPTNQ6XPR3 784 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 Q71RC1 249 aaPredicted RBP4.3□□□□□ -1.72
C9orf72-203ENST00000380003 CCDC116Q8IYX3 515 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 GHDCQ8N2G8 530 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 TMEM151AQ8N4L1 468 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 HORMAD2Q8N7B1 307 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 NAXEQ8NCW5 288 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 BBOF1Q8ND07 529 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 OR4N2Q8NGD1 307 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 OR5M1Q8NGP8 315 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 OR2W6PQ8NHA6 318 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 SMC6Q96SB8 1091 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 CCDC77Q9BR77 488 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 DOHHQ9BU89 302 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 EFCAB11Q9BUY7 163 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 NPDC1Q9NQX5 325 aaPredicted RBP4.3□□□□□ -1.72
C9orf72-203ENST00000380003 SPRR3Q9UBC9 169 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 MRPS33Q9Y291 106 aaKnown RBP4.3□□□□□ -1.72
C9orf72-203ENST00000380003 RPH3AQ9Y2J0 694 aaPredicted RBP4.3□□□□□ -1.72
C9orf72-203ENST00000380003 IKBKGQ9Y6K9 419 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 ARID1AO14497 2285 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 USF3Q68DE3 2245 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 EXOC1LA0A1B0GW35 172 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 H0YC42 278 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 CTAGE8P0CG41 777 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 COX6B1P14854 86 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 SOX18P35713 384 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 STARP49675 285 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 XKP51811 444 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 NAGLUP54802 743 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 TPD52P55327 224 aaPredicted RBP4.3□□□□□ -1.72
C9orf72-203ENST00000380003 RBPJQ06330 500 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 FOXO1Q12778 655 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 TECRLQ5HYJ1 363 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 DCST1Q5T197 706 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 MILR1Q7Z6M3 343 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 YRDCQ86U90 279 aaKnown RBP4.3□□□□□ -1.72
C9orf72-203ENST00000380003 CTAGE4Q8IX94 777 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 ZNF595Q8IYB9 648 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 GCNT2Q8N0V5 402 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 CCNYL1Q8N7R7 359 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 FBXO30Q8TB52 745 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 WDR20Q8TBZ3 569 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 DCAKDQ8WVC6 231 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 DAZLQ92904 295 aaKnown RBP4.3□□□□□ -1.72
C9orf72-203ENST00000380003 TMEM237Q96Q45 408 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 TRIM8Q9BZR9 551 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 RNF32Q9H0A6 362 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 ACSS3Q9H6R3 686 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 PROK2Q9HC23 129 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 NSMCE4AQ9NXX6 385 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 COPS7AQ9UBW8 275 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 BCAP29Q9UHQ4 241 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 YARS2Q9Y2Z4 477 aaKnown RBP4.3□□□□□ -1.72
C9orf72-203ENST00000380003 ASB4Q9Y574 426 aa4.3□□□□□ -1.72
C9orf72-203ENST00000380003 NUP214P35658 2090 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 PCNX3Q9H6A9 2034 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 C15orf38-AP3S2A0A0A6YYH1 394 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 A8MT66 165 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 B4DXG7 233 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 TOXO94900 526 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 CLDN9O95484 217 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 CPMP14384 443 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 CRABP2P29373 138 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 CASP2P42575 452 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ALDH18A1P54886 795 aaKnown RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 PER3P56645 1201 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 NUP107P57740 925 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 TLE4Q04727 773 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 TRAF3Q13114 568 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ACAP2Q15057 778 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 PRSS53Q2L4Q9 553 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ZNF630Q2M218 657 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 EIPR1Q53HC9 387 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 CCNYL2Q5T2Q4 361 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 FRG2Q64ET8 278 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 RTL6Q6ICC9 239 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 GRHL2Q6ISB3 625 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 MEX3BQ6ZN04 569 aaKnown RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 LRRC70Q7Z2Q7 622 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 COMMD6Q7Z4G1 85 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 LAS2Q8IYD9 372 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 C1orf52Q8N6N3 182 aaKnown RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ZFP62Q8NB50 900 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 FAM98AQ8NCA5 519 aaKnown RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 SELENOMQ8WWX9 145 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 SLC9A6Q92581 669 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 EXOSC8Q96B26 276 aaKnown RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 RGMAQ96B86 450 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 CMTM7Q96FZ5 175 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 FRG2BQ96QU4 278 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 TBCDQ9BTW9 1192 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 NXF5Q9H1B4 397 aaKnown RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ELOVL6Q9H5J4 265 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms