RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 POU2F3Q9UKI9 436 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 A0A1W2PRQ8 180 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 NAP1L6A6NFF2 107 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 CD8B2A6NJW9 211 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 SLC22A31A6NKX4 558 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 OR2AT4A6NND4 320 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 GNRH1P01148 92 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 CD8BP10966 210 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF234Q14588 700 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 PPP2R2DQ66LE6 453 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 C6orf120Q7Z4R8 191 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 LRRTM3Q86VH5 581 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.37□□□□□ -1.07
PCDH9-202ENST00000377865 INO80EQ8NBZ0 244 aaPredicted RBP8.37□□□□□ -1.07
PCDH9-202ENST00000377865 TMEM19Q96HH6 336 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 RIPOR3Q96MK2 946 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 PAAF1Q9BRP4 392 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 MRPS23Q9Y3D9 190 aaKnown RBP8.37□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF831Q5JPB2 1677 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 WNK3Q9BYP7 1800 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 KLK8O60259 260 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 GJB5O95377 273 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 GBAP04062 536 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 C21orf33P30042 268 aaPredicted RBP8.37□□□□□ -1.07
PCDH9-202ENST00000377865 CLCN7P51798 805 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 TAP2Q03519 686 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 TMEM115Q12893 351 aaPredicted RBP8.37□□□□□ -1.07
PCDH9-202ENST00000377865 SMN1Q16637 294 aaKnown RBP8.37□□□□□ -1.07
PCDH9-202ENST00000377865 TMEM207Q6UWW9 146 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 PAQR7Q86WK9 346 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 SYNPOQ8N3V7 929 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 SYT14Q8NB59 555 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 OR51G2Q8NGK0 314 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 SGCDQ92629 289 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 ECHDC3Q96DC8 303 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 MCHR1Q99705 422 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 IFT46Q9NQC8 304 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 PLCXD1Q9NUJ7 323 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 MEMO1Q9Y316 297 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 E7EQ34 232 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 ANHXE9PGG2 379 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 TNFRSF10AO00220 468 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 CXCL14O95715 111 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 EFR3AQ14156 821 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 FAM198BQ6UWH4 519 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 ABHD13Q7L211 337 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 CEACAM19Q7Z692 300 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 RAB8BQ92930 207 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 TCEAL4Q96EI5 215 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 C12orf66Q96MD2 445 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 GABARAPL3Q9BY60 117 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 AMBRA1Q9C0C7 1298 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 MTG2Q9H4K7 406 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 PELI2Q9HAT8 420 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 THSD1Q9NS62 852 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 COL4A1P02462 1669 aa8.37□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF840PA6NDX5 716 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 TMEM189-UBE2V1I3L0A0 370 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 CCL16O15467 120 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 PRODHO43272 600 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 CD2P06729 351 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 PIPP12273 146 aaPredicted RBP8.36□□□□□ -1.07
PCDH9-202ENST00000377865 PRKACBP22694 351 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 RBMS1P29558 406 aaKnown RBP8.36□□□□□ -1.07
PCDH9-202ENST00000377865 PREPP48147 710 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 AKIRIN2Q53H80 203 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF648Q5T619 568 aaPredicted RBP8.36□□□□□ -1.07
PCDH9-202ENST00000377865 SLX4IPQ5VYV7 408 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 DUS1LQ6P1R4 473 aaKnown RBP8.36□□□□□ -1.07
PCDH9-202ENST00000377865 UBE2Q1Q7Z7E8 422 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 MS4A15Q8N5U1 240 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 TOR1AIP2Q8NFQ8 470 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 OR8K5Q8NH50 307 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF563Q8TA94 476 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF354BQ96LW1 612 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 PLAC1Q9HBJ0 212 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 HCN3Q9P1Z3 774 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 GLS2Q9UI32 602 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 PLCL2Q9UPR0 1127 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 SCN4AP35499 1836 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 TEX13CA0A0J9YWL9 993 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 MCIDASD6RGH6 385 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 EMC8O43402 210 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 KRT33AO76009 404 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 PAHP00439 452 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 FHP07954 510 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 PRAMEF17Q5VTA0 474 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 AFMIDQ63HM1 303 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 LRRN1Q6UXK5 716 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 KLBQ86Z14 1044 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 PGBD5Q8N414 524 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 GLYATL1Q969I3 302 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF689Q96CS4 500 aaPredicted RBP8.36□□□□□ -1.07
PCDH9-202ENST00000377865 LRIG1Q96JA1 1093 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 PCDHGA2Q9Y5H1 932 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 STRCP1A6NGW2 1772 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 HYKKA2RU49 373 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 ARHGAP33O14559 1287 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 ERI3O43414 337 aaKnown RBP8.36□□□□□ -1.07
PCDH9-202ENST00000377865 TSPAN6O43657 245 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms