RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CRB3Q9BUF7 120 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 ACTR10Q9NZ32 417 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 SPO11Q9Y5K1 396 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 SEC23BQ15437 767 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 UGT3A2Q3SY77 523 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 SHQ1Q6PI26 577 aaKnown RBP13.01□□□□□ -0.33
GPC6-201ENST00000377047 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.01□□□□□ -0.33
GPC6-201ENST00000377047 SLC15A3Q8IY34 581 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 C16orf78Q8WTQ4 265 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 SGTBQ96EQ0 304 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 PGAM5Q96HS1 289 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 CCNL2Q96S94 520 aaPredicted RBP13.01□□□□□ -0.33
GPC6-201ENST00000377047 MAP3K3Q99759 626 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 STARD5Q9NSY2 213 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 AASSQ9UDR5 926 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 CHD4Q14839 1912 aa13.01□□□□□ -0.33
GPC6-201ENST00000377047 TEX13DA0A0J9YY54 714 aaPredicted RBP13□□□□□ -0.33
GPC6-201ENST00000377047 GPR37L1O60883 481 aa13□□□□□ -0.33
GPC6-201ENST00000377047 SLC16A8O95907 504 aa13□□□□□ -0.33
GPC6-201ENST00000377047 MSX1P28360 303 aa13□□□□□ -0.33
GPC6-201ENST00000377047 ACADVLP49748 655 aa13□□□□□ -0.33
GPC6-201ENST00000377047 HNRNPA1L2Q32P51 320 aaKnown RBP13□□□□□ -0.33
GPC6-201ENST00000377047 ALG10Q5BKT4 473 aa13□□□□□ -0.33
GPC6-201ENST00000377047 KCTD18Q6PI47 426 aaPredicted RBP13□□□□□ -0.33
GPC6-201ENST00000377047 C3orf58Q8NDZ4 430 aa13□□□□□ -0.33
GPC6-201ENST00000377047 C15orf40Q8WUR7 153 aa13□□□□□ -0.33
GPC6-201ENST00000377047 SLC7A6OSQ96CW6 309 aaPredicted RBP13□□□□□ -0.33
GPC6-201ENST00000377047 STOX2Q9P2F5 926 aaPredicted RBP13□□□□□ -0.33
GPC6-201ENST00000377047 RGPD5Q99666 1765 aa13□□□□□ -0.33
GPC6-201ENST00000377047 TBX10O75333 385 aa13□□□□□ -0.33
GPC6-201ENST00000377047 AK1P00568 194 aa13□□□□□ -0.33
GPC6-201ENST00000377047 ZNF888P0CJ79 500 aaPredicted RBP13□□□□□ -0.33
GPC6-201ENST00000377047 GRPRP30550 384 aa13□□□□□ -0.33
GPC6-201ENST00000377047 DNASE1L3Q13609 305 aa13□□□□□ -0.33
GPC6-201ENST00000377047 LIX1LQ8IVB5 337 aa13□□□□□ -0.33
GPC6-201ENST00000377047 UHRF1Q96T88 793 aaPredicted RBP13□□□□□ -0.33
GPC6-201ENST00000377047 PELI2Q9HAT8 420 aa13□□□□□ -0.33
GPC6-201ENST00000377047 CCDC59Q9P031 241 aaKnown RBP13□□□□□ -0.33
GPC6-201ENST00000377047 POLR1CO15160 346 aaPredicted RBP13□□□□□ -0.33
GPC6-201ENST00000377047 ZNF806P0C7X5 589 aa13□□□□□ -0.33
GPC6-201ENST00000377047 VAMP1P23763 118 aa13□□□□□ -0.33
GPC6-201ENST00000377047 GGT2P36268 569 aa13□□□□□ -0.33
GPC6-201ENST00000377047 UBE2NP61088 152 aaKnown RBP13□□□□□ -0.33
GPC6-201ENST00000377047 ADAM15Q13444 863 aa13□□□□□ -0.33
GPC6-201ENST00000377047 PYHIN1Q6K0P9 492 aa13□□□□□ -0.33
GPC6-201ENST00000377047 FAM180BQ6P0A1 224 aa13□□□□□ -0.33
GPC6-201ENST00000377047 UBE2Q1Q7Z7E8 422 aa13□□□□□ -0.33
GPC6-201ENST00000377047 TREML1Q86YW5 311 aa13□□□□□ -0.33
GPC6-201ENST00000377047 DDIT4LQ96D03 193 aa13□□□□□ -0.33
GPC6-201ENST00000377047 CLSTN3Q9BQT9 956 aa13□□□□□ -0.33
GPC6-201ENST00000377047 SLC5A7Q9GZV3 580 aa13□□□□□ -0.33
GPC6-201ENST00000377047 SAGE1Q9NXZ1 904 aa13□□□□□ -0.33
GPC6-201ENST00000377047 ERVK-18Q9QC07 812 aa13□□□□□ -0.33
GPC6-201ENST00000377047 HCFC2Q9Y5Z7 792 aa13□□□□□ -0.33
GPC6-201ENST00000377047 OR2AT4A6NND4 320 aa13□□□□□ -0.33
GPC6-201ENST00000377047 ANHXE9PGG2 379 aa13□□□□□ -0.33
GPC6-201ENST00000377047 NUAK1O60285 661 aa13□□□□□ -0.33
GPC6-201ENST00000377047 MALLQ13021 153 aa13□□□□□ -0.33
GPC6-201ENST00000377047 VMACQ2NL98 169 aa13□□□□□ -0.33
GPC6-201ENST00000377047 HTR3DQ70Z44 454 aa13□□□□□ -0.33
GPC6-201ENST00000377047 HSD11B1LQ7Z5J1 315 aa13□□□□□ -0.33
GPC6-201ENST00000377047 ZNF440Q8IYI8 595 aa13□□□□□ -0.33
GPC6-201ENST00000377047 DMRTB1Q96MA1 342 aa13□□□□□ -0.33
GPC6-201ENST00000377047 SERINC2Q96SA4 455 aa13□□□□□ -0.33
GPC6-201ENST00000377047 MKLN1Q9UL63 735 aa13□□□□□ -0.33
GPC6-201ENST00000377047 SCN11AQ9UI33 1791 aa13□□□□□ -0.33
GPC6-201ENST00000377047 PRAMEF2O60811 474 aa13□□□□□ -0.33
GPC6-201ENST00000377047 F8A1P23610 371 aa13□□□□□ -0.33
GPC6-201ENST00000377047 AK4P27144 223 aaPredicted RBP13□□□□□ -0.33
GPC6-201ENST00000377047 CD6P30203 668 aa13□□□□□ -0.33
GPC6-201ENST00000377047 TNFRSF4P43489 277 aa13□□□□□ -0.33
GPC6-201ENST00000377047 MARCH8Q5T0T0 291 aa13□□□□□ -0.33
GPC6-201ENST00000377047 CST9Q5W186 159 aa13□□□□□ -0.33
GPC6-201ENST00000377047 SLC27A4Q6P1M0 643 aa13□□□□□ -0.33
GPC6-201ENST00000377047 LRRC69Q6ZNQ3 347 aa13□□□□□ -0.33
GPC6-201ENST00000377047 TMED4Q7Z7H5 227 aa13□□□□□ -0.33
GPC6-201ENST00000377047 ZNF554Q86TJ5 538 aa13□□□□□ -0.33
GPC6-201ENST00000377047 RELL1Q8IUW5 271 aa13□□□□□ -0.33
GPC6-201ENST00000377047 GALNT15Q8N3T1 639 aa13□□□□□ -0.33
GPC6-201ENST00000377047 HORMAD2Q8N7B1 307 aa13□□□□□ -0.33
GPC6-201ENST00000377047 DNAAF1Q8NEP3 725 aa13□□□□□ -0.33
GPC6-201ENST00000377047 PGAP3Q96FM1 320 aaPredicted RBP13□□□□□ -0.33
GPC6-201ENST00000377047 S100A16Q96FQ6 103 aaKnown RBP13□□□□□ -0.33
GPC6-201ENST00000377047 ZNF559Q9BR84 538 aa13□□□□□ -0.33
GPC6-201ENST00000377047 SLC22A4Q9H015 551 aa13□□□□□ -0.33
GPC6-201ENST00000377047 BRINP1O60477 761 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 IRF2P14316 349 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 MVKQ03426 396 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 IRF4Q15306 451 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 WSCD2Q2TBF2 565 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 NDUFAF5Q5TEU4 345 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 CWF19L1Q69YN2 538 aaKnown RBP12.99□□□□□ -0.33
GPC6-201ENST00000377047 DUS1LQ6P1R4 473 aaKnown RBP12.99□□□□□ -0.33
GPC6-201ENST00000377047 PLEKHG7Q6ZR37 379 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 ZUFSPQ96AP4 578 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 MROQ9BYG7 248 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 YTHDF1Q9BYJ9 559 aaKnown RBP12.99□□□□□ -0.33
GPC6-201ENST00000377047 AIG1Q9NVV5 245 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 KCNS2Q9ULS6 477 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 AHDC1Q5TGY3 1603 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms