RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 KLHL17Q6TDP4 642 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 TIGD4Q8IY51 512 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 LAS2Q8IYD9 372 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 OR8H3Q8N146 312 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 C19orf18Q8NEA5 215 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 VN1R2Q8NFZ6 395 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 CDC26Q8NHZ8 85 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 CMTM7Q96FZ5 175 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 AIFM2Q9BRQ8 373 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 PPIL3Q9H2H8 161 aaKnown RBP12.29□□□□□ -0.44
MSH5-204ENST00000375755 ELOVL6Q9H5J4 265 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 B3GAT2Q9NPZ5 323 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 DNAJC27Q9NZQ0 273 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 TMCC3Q9ULS5 477 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 YBX2Q9Y2T7 364 aaKnown RBP12.29□□□□□ -0.44
MSH5-204ENST00000375755 PCDHB11Q9Y5F2 797 aa12.29□□□□□ -0.44
MSH5-204ENST00000375755 ZNF106Q9H2Y7 1883 aaKnown RBP12.28□□□□□ -0.44
MSH5-204ENST00000375755 LOC102723532A0A0G2JNH3 316 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.28□□□□□ -0.44
MSH5-204ENST00000375755 CARNS1A5YM72 827 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 BTN3A3O00478 584 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 PCDH7O60245 1069 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 SLC25A14O95258 325 aaPredicted RBP12.28□□□□□ -0.44
MSH5-204ENST00000375755 IL1AP01583 271 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 SLC2A2P11168 524 aaPredicted RBP12.28□□□□□ -0.44
MSH5-204ENST00000375755 AMD1P17707 334 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 ABATP80404 500 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 ZNF267Q14586 743 aaPredicted RBP12.28□□□□□ -0.44
MSH5-204ENST00000375755 SUZ12Q15022 739 aaKnown RBP12.28□□□□□ -0.44
MSH5-204ENST00000375755 ZNF628Q5EBL2 1059 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 TRIQKQ629K1 86 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 WDR53Q7Z5U6 358 aaPredicted RBP12.28□□□□□ -0.44
MSH5-204ENST00000375755 FAM9CQ8IZT9 166 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 SCAMP4Q969E2 229 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 KIAA1143Q96AT1 154 aaPredicted RBP12.28□□□□□ -0.44
MSH5-204ENST00000375755 HYLS1Q96M11 299 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 C11orf16Q9NQ32 467 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 B4GALT6Q9UBX8 382 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 SLC25A13Q9UJS0 675 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 RFXAPO00287 272 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 LYRM1O43325 122 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 HLA-DQB1P01920 261 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 C1SP09871 688 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 LAMP1P11279 417 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 COX7A2P14406 83 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 PRPS1L1P21108 318 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 ACRV1P26436 265 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 MAPK1P28482 360 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 SDC2P34741 201 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 SLC6A11P48066 632 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 RGS4P49798 205 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 CAV3P56539 151 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 B4GALNT1Q00973 533 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 P2RY14Q15391 338 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 FLYWCH1Q4VC44 716 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 ARSIQ5FYB1 569 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 TMIGD1Q6UXZ0 262 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 SYT12Q8IV01 421 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 NAGSQ8N159 534 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 STK40Q8N2I9 435 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 Q8N402 240 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 CLDN22Q8N7P3 220 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 TMEM145Q8NBT3 493 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 SLC37A3Q8NCC5 494 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 ZNF680Q8NEM1 530 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 MSANTD3Q96H12 275 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 MRGPRX3Q96LB0 322 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 GPR137Q96N19 417 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 BRD9Q9H8M2 597 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 YARS2Q9Y2Z4 477 aaKnown RBP12.28□□□□□ -0.44
MSH5-204ENST00000375755 SNX11Q9Y5W9 270 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 ATG2BQ96BY7 2078 aa12.28□□□□□ -0.44
MSH5-204ENST00000375755 FABP7O15540 132 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 HCN1O60741 890 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 SOCS5O75159 536 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 LEFTY1O75610 366 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 RFPL3O75679 317 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 PCGF2P35227 344 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 FEN1P39748 380 aaKnown RBP12.27□□□□□ -0.44
MSH5-204ENST00000375755 CRISP1P54107 249 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 RGS1Q08116 209 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 RGNQ15493 299 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 FRMPD2BQ6IN97 320 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 ANKRD54Q6NXT1 300 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 MZT2BQ6NZ67 158 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 TEX261Q6UWH6 196 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 HSDL2Q6YN16 418 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 PDZD3Q86UT5 571 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 SYT14Q8NB59 555 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 AQP11Q8NBQ7 271 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 PCNPQ8WW12 178 aaKnown RBP12.27□□□□□ -0.44
MSH5-204ENST00000375755 ECHDC3Q96DC8 303 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 SCRN2Q96FV2 425 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 MAPKAP1Q9BPZ7 522 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 MARVELD1Q9BSK0 173 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 CRLS1Q9UJA2 301 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 PCDHB1Q9Y5F3 818 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 KCNE2Q9Y6J6 123 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 U3KQ87 197 aa12.27□□□□□ -0.44
MSH5-204ENST00000375755 TCF20Q9UGU0 1960 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms